Gene ECH74115_1986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1986 
Symbol 
ID6968503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1879915 
End bp1880823 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content50% 
IMG OID643385910 
Productputative DNA-binding transcriptional regulator 
Protein accessionYP_002270399 
Protein GI209396807 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.388332 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTTC AGGTAAAAAT TCATCAAATT CGGGCTTTTG TTGAAGTGGC TCGTCAGGGC 
AGCATTCGCG GAGCGAGCCG AATGTTGAAT ATGTCGCAAC CGGCACTGAG TAAATCTATT
CAGGAGCTGG AAGAAGGGTT AGCGGCGCAA CTCTTTTTTC GCCGTAGTAA AGGCGTGACG
TTAACTGATG CCGGTGAAAG TTTTTATCAG CACGCCAGTC TTATTCTTGA AGAACTGCGC
GCAGCCCAAG AGGATATTCG CCAACGACAA GGGCAACTGG CAGGGCAGAT TAATATCGGC
ATGGGGGCCA GTATTTCCCG CAGTCTGATG CCAGCTGTAA TATCTCGTTT TCATCAGCAG
CATCCGCAGG TAAAAGTACG CATTATGGAA GGGCAACTGG TGTCGATGAT TAATGAATTG
CGTCAGGGAG AATTGGATTT CACCATCAAT ACCTATTATC AGGGACCGTA CGACCACGAA
TTTACTTTTG AGAAATTACT GGAAAAGCAA TTCGCGATCT TTTGCCGCCC GGGACACCCC
GCCATTGGTG CCCGTTCGAT CAAACAGTTA CTGGATTACA GCTGGACAAT GCCGACGCCA
CACGGCAGCT ACTACAAACA GTTGAGTGAA TTGCTTGACG ATCAGGCGCA AACGCCACAG
GTCGGTGTAG TCTGCGAGAC GTTCTCAGCC TGTATCAGTC TGGTGGCAAA AAGCGATTTT
CTCAGCATAC TGCCTGAAGA AATGGGCTGC GATCCCTTGC ACGGACAGGG GCTGGTGATG
TTGCCGGTTA GCGAAATTTT ACCGAAAGCG GCCTATTATT TGATTCAGCG GCGTGATAGT
CGCCAGACAC CACTGACCGC GTCATTAATC ACGCAATTCC GGCGAGAATG CGGCTATCTG
CAAAGTTAA
 
Protein sequence
MAFQVKIHQI RAFVEVARQG SIRGASRMLN MSQPALSKSI QELEEGLAAQ LFFRRSKGVT 
LTDAGESFYQ HASLILEELR AAQEDIRQRQ GQLAGQINIG MGASISRSLM PAVISRFHQQ
HPQVKVRIME GQLVSMINEL RQGELDFTIN TYYQGPYDHE FTFEKLLEKQ FAIFCRPGHP
AIGARSIKQL LDYSWTMPTP HGSYYKQLSE LLDDQAQTPQ VGVVCETFSA CISLVAKSDF
LSILPEEMGC DPLHGQGLVM LPVSEILPKA AYYLIQRRDS RQTPLTASLI TQFRRECGYL
QS