Gene ECH74115_1971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1971 
Symbol 
ID6969100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1863759 
End bp1864724 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content54% 
IMG OID643385896 
Productmandelate racemase/muconate lactonizing enzyme family protein 
Protein accessionYP_002270385 
Protein GI209399075 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.402393 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACCG TTAAGGTATT TGAGGAAGCC TGGCCCTTAC ATACCCCGTT TGTGATTGCC 
CGGGGAAGTC GCAGTGAAGC GCGCGTGGTG GTGGTTGAAC TGGAAGAAGA GGGTATTAAA
GGCACCGGCG AATGCACGCC GTATCCGCGT TATGGAGAAA GTGATGCCTC GGTAATGGCG
CAAATTATGA GCGTCGTGCC GCAATTAGAG AAAGGGCTGA CACGGGAGGA GTTGCAAAAA
ATTCTCCCTG CCGGCGCAGC ACGTAATGCG CTGGATTGTG CATTGTGGGA TCTGGCCGCG
CGAAAACAGC AGCAATCGCT GGCTGATTTG ATCGGCATAA CGCTTCCCGA GACAGTTATC
ACTGCACAGA CGGTAGTCAT CGGTACGCCT GATCAGATGG CCAATAGTGC ATCAACACTC
TGGCAGGCCG GCGCGAAATT ACTGAAAGTG AAGCTGGATA ACCATCTTAT CAGTGAGCGG
ATGGTGGCAA TTCGCACAGC TGTGCCCGAT ACCACGCTGA TCGTTGATGC AAATGAATCC
TGGCATGCAG AAGGGTTGGC GGCACGTTGC CAGCTATTGG CGGATTTAGG CGTTGCGATG
CTTGAACAAC CGCTTCCTGC GCAGGACGAT GCGGCGCTGG AGAATTTTAT TCATCCGTTG
CCGATTTGTG CTGATGAAAG TTGTCATACT CGTAGCAATT TGAAGGCGCT GAAAGGGCGC
TATGAGATGG TTAATATTAA GCTCGATAAA ACCGGGGGTC TGACGGAAGC GCTGGCGCTG
GCGACTGAAG CGCGTGCACA AGGTTTCAGT CTGATGCTGG GCTGCATGTT GTGTACCTCT
CGGGCCATTA GCGCCGCTTT ACCGCTGGTG CCGCAGGTCA GTTTCGCCGA TCTTGACGGA
CCGACCTGGC TGGCGGTAGA TGTGGAACCG GCGCTTCAGT TCACGACGGG CGAATTGCAT
CTTTAG
 
Protein sequence
MRTVKVFEEA WPLHTPFVIA RGSRSEARVV VVELEEEGIK GTGECTPYPR YGESDASVMA 
QIMSVVPQLE KGLTREELQK ILPAGAARNA LDCALWDLAA RKQQQSLADL IGITLPETVI
TAQTVVIGTP DQMANSASTL WQAGAKLLKV KLDNHLISER MVAIRTAVPD TTLIVDANES
WHAEGLAARC QLLADLGVAM LEQPLPAQDD AALENFIHPL PICADESCHT RSNLKALKGR
YEMVNIKLDK TGGLTEALAL ATEARAQGFS LMLGCMLCTS RAISAALPLV PQVSFADLDG
PTWLAVDVEP ALQFTTGELH L