Gene ECH74115_1970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1970 
Symbol 
ID6970177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1864699 
End bp1865427 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content55% 
IMG OID643385897 
Productmurein peptide amidase A 
Protein accessionYP_002270386 
Protein GI209398476 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2866] Predicted carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.996708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.386863 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTAA CCCGCCCACG CGCCGAACGC GGCGCATTTC CGCCCGGAAC AGAACATTAC 
GGACGTTCAT TATTGGGCGC GCCGTTAATC TGGTTTCCGG CCCCTGCAGC CAGTCGCGAA
AGTGGTTTGA TTCTGGCTGG CACTCACGGT GATGAAAACT CTTCGGTCGT CACGCTCTCC
TGTGCTCTGC GGACTTTGAC ACCTTCTTTG CGCCGCCATC ATGTGGTGCT GTGTGTGAAT
CCTGACGGCT GCCAGCTGGG GTTACGGGCC AATGCTAATG GTGTGGATTT AAACAGAAAC
TTTCCGGCGG CGAACTGGAA GGAAGGTGAA ACGGTTTATC GCTGGAACAG CGCCGCTGAA
GAACGTGATG TCGTATTACT GACAGGTGAC AAACCTGGCT CCGAACCTGA AACCCAGGCG
CTGTGCCAGC TTATACACCG CATTCAACCT GCCTGGGTGG TCTCATTCCA CGATCCACTG
GCCTGTATTG AAGATCCCAG ACACAGCGAA TTAGGCGAAT GGCTGGCTCA GGCGTTTGAA
TTGCCTCTGG TAACCAGCGT CGGTTATGAA ACGCCTGGCT CTTTCGGCAG TTGGTGTGCA
GATCTGAACT TGCATTGCAT CACCGCAGAG TTTCCGCCCA TCTCCTCCGA CGAAGCCAGC
GAAAAATATC TCTTTGCGAT GGCAAACTTG CTGCGCTGGC ATCCTAAAGA TGCAATTCGC
CCGTCGTGA
 
Protein sequence
MTVTRPRAER GAFPPGTEHY GRSLLGAPLI WFPAPAASRE SGLILAGTHG DENSSVVTLS 
CALRTLTPSL RRHHVVLCVN PDGCQLGLRA NANGVDLNRN FPAANWKEGE TVYRWNSAAE
ERDVVLLTGD KPGSEPETQA LCQLIHRIQP AWVVSFHDPL ACIEDPRHSE LGEWLAQAFE
LPLVTSVGYE TPGSFGSWCA DLNLHCITAE FPPISSDEAS EKYLFAMANL LRWHPKDAIR
PS