| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1965 |
|---|
| Symbol | |
|---|
| ID | 6966570 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 1857793 |
|---|
| End bp | 1858791 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643385891 |
|---|
| Product | transcriptional regulator, LacI family |
|---|
| Protein accession | YP_002270380 |
|---|
| Protein GI | 209396470 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 0.543817 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCCTA CTATTTATGA TATTGCCAGG GTTGCAGGCG TATCAAAATC CACCGTATCA
CGCGTGCTGA ATAAGCAAAC CAATATCTCC CCGGAAGCGC GCGAAAAAGT GTTACGGGCC
ATTGAAGAAT TACAGTATCA ACCAAACAAG CTGGCCCGCG CGCTGACCTC TTCGGGTTTT
GATGCCATTA TGGTGATTTC TACCCGTTCG ACCAAAACTA CGGCGGGTAA TCCGTTTTTC
TCTGAAGTTT TGCATGCCAT CACCGCCAAA GCTGAAGAAG AAGGTTTCGA CGTGATATTG
CAGACGTCGC ACACCCCGGC AGAAGACTTA CAAAAATGTG AAAGCAAAAT TAAGCAGAAA
ATGATTAAAG GCATTATTAT GCTAAGTTCG CCAGCGGATG AGTCATTTTT TGCCCAACTT
GATAAATACG ATATTCCTGT GGTGGTGATT GGCAAAGTTG AAGGTCAATA TGCCCATGTT
TATTCTGTCG ATACCGATAA TTTTGGTGAC AGCATTGCGT TGACCGATGC GTTAATTGAA
AGTGGACATC AAAATATTGC CTGTCTGCAT GCACCGCTTG ATGTCCATGT TTCAGTGGAT
CGGGTAAATG GTTATAAGCA GAGTCTGGAA GATCATAATA TTGCAGTGCG TGATGAATGG
ATTGTTGATG GCGGTTATAC CCATGAAACA GCACTGCAAG CAGCACGGCA ATTATTAAGT
CAGTCACCGT TGCCTGAGGC AGTGTTTGCC ACTGACAGCC TGAAATTAAT GAGCATTTAT
CGTGCGGCGG CAGAGAAAAA CATTGCTATT CCGCAGCAGT TAGCGGTGGT GGGTTATAGC
AATGAAACGC TGTCATTTAT TTTAACGCCT GCACCGGGCG GCATCGATGT TCCGACGCAG
GAGTTAGGTC GACAAAGCTG TGAGTTATTA TTCCGCTTAA TTGCCGGAAA ACCGTCACCA
CAAAATATTA CCGTTGCCAC GCATATGACG CTGAAATAA
|
|---|
| Protein sequence | MSPTIYDIAR VAGVSKSTVS RVLNKQTNIS PEAREKVLRA IEELQYQPNK LARALTSSGF
DAIMVISTRS TKTTAGNPFF SEVLHAITAK AEEEGFDVIL QTSHTPAEDL QKCESKIKQK
MIKGIIMLSS PADESFFAQL DKYDIPVVVI GKVEGQYAHV YSVDTDNFGD SIALTDALIE
SGHQNIACLH APLDVHVSVD RVNGYKQSLE DHNIAVRDEW IVDGGYTHET ALQAARQLLS
QSPLPEAVFA TDSLKLMSIY RAAAEKNIAI PQQLAVVGYS NETLSFILTP APGGIDVPTQ
ELGRQSCELL FRLIAGKPSP QNITVATHMT LK
|
|---|
| |