| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1960 |
|---|
| Symbol | |
|---|
| ID | 6972158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 1851661 |
|---|
| End bp | 1852716 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643385886 |
|---|
| Product | gfo/idh/mocA family protein |
|---|
| Protein accession | YP_002270375 |
|---|
| Protein GI | 209397813 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.430175 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 0.910454 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAGTG CAATGACAAG CTCTCCACTG CGGGTCGCGA TAATAGGCGC AGGCCAGGTG
GCGGATAAGG TTCATGCTTC GTACTACTGC ACCCGCAACG ATCTGGAACT GGTGGCTGTC
TGTGACAGCC GCCTTTCCCA GGCGCAGGCG CTGGCAGAAA AATACGGGAA TGCATCCGTG
TGGGACGATC CGCAGGCCAT GCTGCTGGCG GTGAAACCTG ATGTGGTTAG CGTCTGCTCA
CCTAACCGTT TTCATTACGA ACATACCCTG ATGGCGCTGG AAGCGGGCTG CCATGTGATG
TGCGAAAAAC CGCCCGCCAT GACGCCAGAA CAGGCGCGGG AAATGTGCGA TACCGCGCGC
AAACAGGGCA AGGTGCTGGC CTACGACTTT CACCATCGTT TTGCGCTCGA TACGCAACAG
CTGCGTGAAC AGGTGACCAA CGGCGTTTTG GGAGAGATTT ACGTTACCAC CGCCCGCGCC
CTGCGTCGCT GCGGCGTTCC CGGCTGGGGT GTCTTTACCA ATAAAGAACT GCAGGGTGGT
GGCCCGCTGA TCGACATCGG CATTCATATG CTGGATGCTG CGATGTATGT GCTGGGCTAT
CCTGCGGTGA AAAGCGTGAA TGCGCATAGC TTTCAAAAGA TCGGCACGCA AAAGAGCTGT
GGTCAATTTG GCGAGTGGGA TCCGGCAACT TACAGCGTCG AAGATTCGCT GTTTGGCACC
ATTGAATTTC ATAACGGCGG CATTCTGTGG CTGGAAACGT CATTTGCGCT CAACATCCGC
GAACAGTCGA TTATGAACGT CAGCTTTTGT GGTGATAAAG CCGGTGCGAC GCTGTTTCCA
GCACATATCT ACACCGATAA CAACGGTGAA TTAATGACGC TGATGCAACG GGAAATGGCA
GACGACAACC GCCATTTGGG CAGCATGGAA GCCTTTATCA ATCACGTACA GGGCAAGCCC
GTGATGATAG CCGACGCCGA GCAGGGGTAC ATCATCCAGC AACTGGTGGC GGCGTTATAT
CAATCCGCAG AAACAGGGAC GCGTGTGGAA TTATGA
|
|---|
| Protein sequence | MKSAMTSSPL RVAIIGAGQV ADKVHASYYC TRNDLELVAV CDSRLSQAQA LAEKYGNASV
WDDPQAMLLA VKPDVVSVCS PNRFHYEHTL MALEAGCHVM CEKPPAMTPE QAREMCDTAR
KQGKVLAYDF HHRFALDTQQ LREQVTNGVL GEIYVTTARA LRRCGVPGWG VFTNKELQGG
GPLIDIGIHM LDAAMYVLGY PAVKSVNAHS FQKIGTQKSC GQFGEWDPAT YSVEDSLFGT
IEFHNGGILW LETSFALNIR EQSIMNVSFC GDKAGATLFP AHIYTDNNGE LMTLMQREMA
DDNRHLGSME AFINHVQGKP VMIADAEQGY IIQQLVAALY QSAETGTRVE L
|
|---|
| |