| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1946 |
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| Symbol | pspA |
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| ID | 6970924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 1842913 |
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| End bp | 1843581 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643385876 |
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| Product | phage shock protein PspA |
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| Protein accession | YP_002270365 |
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| Protein GI | 209399315 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | [TIGR02977] phage shock protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTATTT TTTCTCGCTT TGCCGACATC GTGAATGCCA ACATCAACGC TCTGTTAGAG
AAAGCGGAAG ATCCACAGAA ACTGGTGCGT CTGATGATCC AGGAGATGGA AGATACATTG
GTTGAAGTAC GTTCTACTTC GGCGCGTGCG CTGGCAGAAA AGAAACAGCT GACTCGCCGT
ATTGAACAAG CGTCGGCGCG TGAAGTTGAA TGGCAGGAAA AAGCCGAACT GGCGCTGCTG
AAAGAGAGAG AGGATTTGGC GCGTGCGGCG TTAATTGAAA AACAGAAACT GACCGATCTG
ATTAAGTCCC TGGAACATGA AGTGACGCTG GTGGACGATA CGCTGGCACG CATGAAGAAA
GAGATTGGCG AGCTGGAAAA CAAATTGAGC GAAACACGCG CTCGCCAGCA GGCATTGATG
TTACGCCATC AGGCGGCAAA CTCGTCGCGC GATGTGCGTC GTCAGCTGGA CAGTGGCAAA
CTGGATGAAG CAATGGCTCG TTTCGAATCT TTCGAACGTC GTATTGACCA GATGGAAGCG
GAAGCAGAAA GCCACAGCTT CGGTAAACAA AAATCGCTGG ACGATCAGTT TGCCGAACTG
AAAGCCGATG ATGCAATCAG CGAGCAACTG GCACAATTAA AAGCCAAAAT GAAGCAAGAC
AATCAATAA
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| Protein sequence | MGIFSRFADI VNANINALLE KAEDPQKLVR LMIQEMEDTL VEVRSTSARA LAEKKQLTRR
IEQASAREVE WQEKAELALL KEREDLARAA LIEKQKLTDL IKSLEHEVTL VDDTLARMKK
EIGELENKLS ETRARQQALM LRHQAANSSR DVRRQLDSGK LDEAMARFES FERRIDQMEA
EAESHSFGKQ KSLDDQFAEL KADDAISEQL AQLKAKMKQD NQ
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