| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1929 |
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| Symbol | eefC |
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| ID | 6968165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 1824179 |
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| End bp | 1825552 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643385859 |
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| Product | multidrug efflux outer membrane protein EefC |
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| Protein accession | YP_002270348 |
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| Protein GI | 209396466 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.000583054 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTGCGTC GTTCTCTTAT TTTTCTGGTG CTGTTGAGTG CGGGATGTGT CTCGCTCGAT
CCCCACTACA GCACGCCTGA ATCCCCAATC CCGGCGACCT TGCCGGGAGC ACAGGGCCAG
GGAAAGGCAA TCAGCCATGA CTGGCAGCAG GTGATCCACG ATCCCCGATT GCAGCAGGTG
GTGACTATTG CACTGAACAG TAACCGCGAT GTGCAAAAAG CGATTGCTGA TATTGACTCA
GCACGGGCGC TCTATGGGCA AACTAATGCG TCGTTATTCC CGACGGTGAA TGCGGCCTTA
AGTTCAACCC GCAGTCGTTC GCTGGCGAAT GGTACGGAAA CCACTGCCGA GGCTGACGGC
ACGGTGTCCA GTTTTACGTT AGATCTGTTT GGTCGTAATC AGAGTTTATC TCGGGCGGCG
CGAGAAACCT GGCTTGCCAG TGAATTTACA GCCCAGAACA CCCGTTTAAC GCTGATTGCT
GAAATCAGCA CCGCCTGGCT GACACTGGCG GCCGATAACA GCAACCTGGC CCTGGCAAAA
GAAACGATGA CCAGTGCAGA AAACTCATTG AAAATTATCC AGCGCCAGCA ACAGGTTGGC
ACGGCGGCAG CGACAGATGT CAGTGAGGCG ATGAGTGTTT ATCAGCAAGC GCGCGCCAGC
GTTGCCAGCT ATCAGACACA AGTGATGCAG GATAAAAATG CGCTGAACTT ACTGGCAGGT
ACAACGCTTG AGGAAAATTT GCTACCGGGA ACACTGGAAA GCCTGCCGGA ACAGATGATA
AGTCTGGTTC CTGCGGGAGT GTCATCTGAC GTTCTGCTGC GTCGCCCGGA TATCCAGGAA
GCGGAACATA ATTTGAAGAG CGCCAATGCC GATATTGGCG CGGCGCGGGC TAACTTTTTC
CCGACGATTT CGCTGACTGC CAGCGCTGGT GTTGGCAGTG ACGCATTGTC GTCGTTGTTC
AGCCACGGAA TGCAGATCTG GTCATTTACG CCATCGGTCA CATTACCGCT GTTCACTGGC
GGAAGTAATC TGGCGCAGCT TCGTTACGCA GAAGCACAAA AGCGTGGACT CATTGCCACC
TATGAAAAAA CCGTTCAGAG AGCATTTAAA GATGTCGCTA ACGCACTGGC GCGGCGGACC
ACGCTTGAAG AGCAACTGGA TGCACAGCGC CAGTATGTTA AAGCTGAGCA ACAAACGGTC
GATGTTGGCT TGCGTCGCTA TCAGACGGGT GTTGGTGATT ACCTGACCGT GTTGACGGCG
CAGCGCAGCT TGTGGAGCGC ACAGCAGGAG CTGCTGGCAC TGCAACTGAC TGATTTTACA
AACCGAATCA CGCTCTGGCA GTCGCTGGGC GGCGGCATGT CATCACTCAA GTAA
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| Protein sequence | MLRRSLIFLV LLSAGCVSLD PHYSTPESPI PATLPGAQGQ GKAISHDWQQ VIHDPRLQQV
VTIALNSNRD VQKAIADIDS ARALYGQTNA SLFPTVNAAL SSTRSRSLAN GTETTAEADG
TVSSFTLDLF GRNQSLSRAA RETWLASEFT AQNTRLTLIA EISTAWLTLA ADNSNLALAK
ETMTSAENSL KIIQRQQQVG TAAATDVSEA MSVYQQARAS VASYQTQVMQ DKNALNLLAG
TTLEENLLPG TLESLPEQMI SLVPAGVSSD VLLRRPDIQE AEHNLKSANA DIGAARANFF
PTISLTASAG VGSDALSSLF SHGMQIWSFT PSVTLPLFTG GSNLAQLRYA EAQKRGLIAT
YEKTVQRAFK DVANALARRT TLEEQLDAQR QYVKAEQQTV DVGLRRYQTG VGDYLTVLTA
QRSLWSAQQE LLALQLTDFT NRITLWQSLG GGMSSLK
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