Gene ECH74115_1901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1901 
SymbolrluB 
ID6970998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1794576 
End bp1795448 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content54% 
IMG OID643385834 
Product23S rRNA pseudouridylate synthase B 
Protein accessionYP_002270323 
Protein GI209396722 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 
TIGRFAM ID[TIGR00093] pseudouridine synthase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.000000316134 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGAAA AGCTACAGAA AGTGCTGGCG CGTGCCGGCC ACGGTTCTCG CCGTGAAATC 
GAATCTATTA TTGAAGCCGG TCGTGTGAGT GTTGATGGCA AAATTGCTAA ACTCGGCGAT
CGCGTTGAAG TTACCCCTGG ATTGAAAATC CGTATCGATG GTCACCTGAT TTCGGTACGT
GAGTCCGCTG AACAAATTTG TCGCGTTCTG GCCTATTATA AACCGGAAGG TGAGTTGTGT
ACCCGTAACG ATCCGGAAGG GCGTCCAACG GTGTTTGACC GTCTGCCAAA GCTGCGCGGT
GCACGCTGGA TTGCCGTAGG TCGTCTGGAC GTTAACACCT GTGGTCTGTT GCTGTTCACC
ACCGACGGTG AACTGGCTAA CCGTTTAATG CATCCAAGCC GTGAAGTTGA ACGTGAATAT
GCCGTGCGTG TATTTGGTCA GGTTGACGAC GCGAAACTGC GTGATTTAAG CCGTGGTGTG
CAGCTGGAAG ATGGTCCGGC AGCCTTTAAA ACCATCAAGT TCAGCGGCGG CGAAGGGATC
AACCAGTGGT ACAACGTGAC TCTGACCGAA GGCCGTAACC GTGAAGTTCG TCGTCTGTGG
GAAGCGGTTG GCGTGCAGGT AAGCCGCCTG ATCCGTGTTC GTTACGGTGA TATCCCACTG
CCGAAAGGTC TGCCACGCGG CGGCTGGACG GAGCTGGATC TTGCCCAGAC TAACTATCTG
CGCGAACTGG TGGAGTTGCC GCCAGAAACC AGCTCTAAAG TCGCTGTAGA AAAAGACCGT
CGTCGCATGA AGGCGAATCA GATTCGTCGT GCGGTGAAAC GTCACAGTCA GGTGAGCGGC
GGACGTCGTT CTGGTGGGCG TAATAACGGT TAA
 
Protein sequence
MSEKLQKVLA RAGHGSRREI ESIIEAGRVS VDGKIAKLGD RVEVTPGLKI RIDGHLISVR 
ESAEQICRVL AYYKPEGELC TRNDPEGRPT VFDRLPKLRG ARWIAVGRLD VNTCGLLLFT
TDGELANRLM HPSREVEREY AVRVFGQVDD AKLRDLSRGV QLEDGPAAFK TIKFSGGEGI
NQWYNVTLTE GRNREVRRLW EAVGVQVSRL IRVRYGDIPL PKGLPRGGWT ELDLAQTNYL
RELVELPPET SSKVAVEKDR RRMKANQIRR AVKRHSQVSG GRRSGGRNNG