Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_1901 |
Symbol | rluB |
ID | 6970998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 1794576 |
End bp | 1795448 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643385834 |
Product | 23S rRNA pseudouridylate synthase B |
Protein accession | YP_002270323 |
Protein GI | 209396722 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.000000316134 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGAAA AGCTACAGAA AGTGCTGGCG CGTGCCGGCC ACGGTTCTCG CCGTGAAATC GAATCTATTA TTGAAGCCGG TCGTGTGAGT GTTGATGGCA AAATTGCTAA ACTCGGCGAT CGCGTTGAAG TTACCCCTGG ATTGAAAATC CGTATCGATG GTCACCTGAT TTCGGTACGT GAGTCCGCTG AACAAATTTG TCGCGTTCTG GCCTATTATA AACCGGAAGG TGAGTTGTGT ACCCGTAACG ATCCGGAAGG GCGTCCAACG GTGTTTGACC GTCTGCCAAA GCTGCGCGGT GCACGCTGGA TTGCCGTAGG TCGTCTGGAC GTTAACACCT GTGGTCTGTT GCTGTTCACC ACCGACGGTG AACTGGCTAA CCGTTTAATG CATCCAAGCC GTGAAGTTGA ACGTGAATAT GCCGTGCGTG TATTTGGTCA GGTTGACGAC GCGAAACTGC GTGATTTAAG CCGTGGTGTG CAGCTGGAAG ATGGTCCGGC AGCCTTTAAA ACCATCAAGT TCAGCGGCGG CGAAGGGATC AACCAGTGGT ACAACGTGAC TCTGACCGAA GGCCGTAACC GTGAAGTTCG TCGTCTGTGG GAAGCGGTTG GCGTGCAGGT AAGCCGCCTG ATCCGTGTTC GTTACGGTGA TATCCCACTG CCGAAAGGTC TGCCACGCGG CGGCTGGACG GAGCTGGATC TTGCCCAGAC TAACTATCTG CGCGAACTGG TGGAGTTGCC GCCAGAAACC AGCTCTAAAG TCGCTGTAGA AAAAGACCGT CGTCGCATGA AGGCGAATCA GATTCGTCGT GCGGTGAAAC GTCACAGTCA GGTGAGCGGC GGACGTCGTT CTGGTGGGCG TAATAACGGT TAA
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Protein sequence | MSEKLQKVLA RAGHGSRREI ESIIEAGRVS VDGKIAKLGD RVEVTPGLKI RIDGHLISVR ESAEQICRVL AYYKPEGELC TRNDPEGRPT VFDRLPKLRG ARWIAVGRLD VNTCGLLLFT TDGELANRLM HPSREVEREY AVRVFGQVDD AKLRDLSRGV QLEDGPAAFK TIKFSGGEGI NQWYNVTLTE GRNREVRRLW EAVGVQVSRL IRVRYGDIPL PKGLPRGGWT ELDLAQTNYL RELVELPPET SSKVAVEKDR RRMKANQIRR AVKRHSQVSG GRRSGGRNNG
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