| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1895 |
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| Symbol | trpD |
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| ID | 6966745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 1787823 |
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| End bp | 1789418 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643385829 |
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| Product | bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase |
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| Protein accession | YP_002270318 |
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| Protein GI | 209397663 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0512] Anthranilate/para-aminobenzoate synthases component II
[COG0547] Anthranilate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR00566] glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase
[TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.000854588 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTGACA TTCTGCTGCT CGATAATATC GACTCTTTTA CTTACAACCT GGCAGATCAG
TTGCGCAGCA ATGGTCATAA CGTGGTGATT TACCGCAACC ATATTCCGGC GCAGACCTTA
ATTGAACGCC TTGCGACGAT GAGCAATCCG GTGCTGATGC TTTCTCCTGG ACCCGGTGTG
CCGAGCGAAG CTGGTTGTAT GCCTGAACTG CTTACCCGCC TGCGCGGTAA GCTGCCTATT
ATTGGCATTT GCCTTGGTCA TCAGGCGATT GTCGAAGCTT ACGGGGGCTA TGTCGGTCAG
GCGGGCGAAA TTCTTCACGG TAAAGCGTCG AGCATTGAAC ATGACGGTCA GGCGATGTTT
GCCGGATTAA CAAACCCGCT GCCGGTGGCG CGTTATCACT CGCTGGTTGG CAGTAATATT
CCGGCCGGTT TAACCATCAA CGCCCATTTT AATGGCATGG TGATGGCGGT GCGTCACGAT
GCAGATCGCG TTTGCGGATT CCAGTTCCAC CCGGAATCCA TTCTCACCAC CCAGGGCGCT
CGCCTGCTGG AACAAACGCT GGCCTGGGCG CAGCAGAAAC TAGAGCCAAC CAACACGCTG
CAACCGATTC TGGAAAAACT GTATCAGGCG CAGACCCTTA GCCAGCAGGA AAGTCATCAG
CTATTTTCAG CGGTGGTACG TGGTGAACTG AAACCGGAAC ACCTGGCGGC GGCGCTGGTG
AGCATGAAAA TTCGCGGCGA GCACCCGAAC GAGATCGCCG GAGCAGCAAC CGCGCTACTG
GAAAACGCCG CGCCGTTCCC GCGTCCGGAT TATCTGTTTG CCGATATCGT CGGCACCGGC
GGTGACGGCA GCAACAGCAT CAATATTTCC ACCGCCAGTG CGTTTGTCGC CGCGGCCTGT
GGGCTGAAAG TGGCGAAACA CGGCAACCGT AGCGTCTCCA GTAAATCTGG CTCGTCGGAT
CTGCTGGCGG CGTTCGGTAT TAATCTTGAT ATGAACGCCG ATAAATCGCG CCAGGCGCTG
GATGAGTTAG GTGTATGTTT CCTCTTTGCA CCGAAATATC ACACCGGATT TCGCCATGCA
ATGCCGGTTC GCCAGCAACT AAAAACCCGC ACCCTGTTCA ATGTGCTGGG GCCATTGATT
AACCCGGCGC ATCCGCCGCT GGCGTTAATT GGTGTTTATA GTCCGGAACT GGTGCTGCCG
ATTGCCGAAA CCTTACGCGT GCTGGGGTAT CAACGCGCGG CGGTGGTGCA CAGCGGCGGG
ATGGATGAAG TTTCATTACA CGCGCCGACA ATCGTTGCCG AGCTGCATGA CGGCGAAATT
AAGAGCTATC AATTGACCGC TGAAGATTTT GGCCTGACTC CCTACCACCA GGAGCAACTG
GCAGGCGGAA CACCGGAAGA AAACCGTGAC ATTTTAACAC GCTTGTTACA AGGTAAAGGC
GACGCCGCCC ATGAAGCAGC CGTCGCGGCG AATGTCGCCA TGTTAATGCG CCTGCATGGC
CATGAAGATC TGCAAGCCAA TGCGCAAACC GTTCTTGAGG TACTGCGCAG TGGTTCCGCT
TACGACAGAG TCACCGCACT GGCGGCACGA GGGTAA
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| Protein sequence | MADILLLDNI DSFTYNLADQ LRSNGHNVVI YRNHIPAQTL IERLATMSNP VLMLSPGPGV
PSEAGCMPEL LTRLRGKLPI IGICLGHQAI VEAYGGYVGQ AGEILHGKAS SIEHDGQAMF
AGLTNPLPVA RYHSLVGSNI PAGLTINAHF NGMVMAVRHD ADRVCGFQFH PESILTTQGA
RLLEQTLAWA QQKLEPTNTL QPILEKLYQA QTLSQQESHQ LFSAVVRGEL KPEHLAAALV
SMKIRGEHPN EIAGAATALL ENAAPFPRPD YLFADIVGTG GDGSNSINIS TASAFVAAAC
GLKVAKHGNR SVSSKSGSSD LLAAFGINLD MNADKSRQAL DELGVCFLFA PKYHTGFRHA
MPVRQQLKTR TLFNVLGPLI NPAHPPLALI GVYSPELVLP IAETLRVLGY QRAAVVHSGG
MDEVSLHAPT IVAELHDGEI KSYQLTAEDF GLTPYHQEQL AGGTPEENRD ILTRLLQGKG
DAAHEAAVAA NVAMLMRLHG HEDLQANAQT VLEVLRSGSA YDRVTALAAR G
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