| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1894 |
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| Symbol | trpC |
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| ID | 6967389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 1786461 |
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| End bp | 1787819 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643385828 |
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| Product | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase |
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| Protein accession | YP_002270317 |
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| Protein GI | 209395881 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0134] Indole-3-glycerol phosphate synthase
[COG0135] Phosphoribosylanthranilate isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.890724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.00124685 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAACCG TTTTAGCGAA AATCGTCGCA GACAAGGCGA TTTGGGTAGA AGCCCGCAAA
CAGCAGCAAC CGCTGGCCAG TTTTCAGAAT GAGGTTCAGC CGAGCACGCG ACATTTTTAT
GATGCGCTAC AGGGTGCGCG CACGGCGTTT ATTCTGGAGT GCAAGAAAGC GTCGCCGTCA
AAAGGCGTGA TCTGTGATGA TTTCGATCCA GCACGCATTG CCGCCATTTA TAAACATTAC
GCTTCGGCAA TTTCGGTGCT GACTGATGAG AAATATTTTC AGGGGAGCTT TGATTTCCTC
CCCATCGTCA GCCAAATCGC CCCGCAGCCG ATTTTATGTA AAGACTTCAT TATCGACCCT
TACCAGATCT ATCTGGCGCG CTATTACCAG GCCGATGCCT GCTTATTAAT GCTTTCAGTA
CTGGATGACG AACAATATCG CCAGCTTGCC GCCGTCGCCC ACAGTCTGAA GATGGGTGTG
CTGACCGAAG TCAGTAATGA AGAGGAACTG GAGCGCGCCA TTGCATTGGG GGCAAAGGTC
GTTGGCATCA ACAACCGCGA TCTGCGTGAT TTGTCGATTG ATCTCAACCG TACCCGCGAG
CTTGCGCCGA AACTGGGGCA CAACGTGACG GTAATCAGCG AATCAGGCAT CAATACTTAC
GCTCAGGTGC GCGAGTTAAG CCACTTCGCT GACGGTTTTC TAATTGGTTC GGCGTTGATG
GCCCATGACG ATTTGCACGC CGCCGTGCGT CGGGTGTTGC TGGGTGAGAA TAAAGTATGT
GGCCTGACGC GTGGGCAAGA TGCTAAAGCA GCGTACGACG CGGGCGCGAT TTACGGTGGG
TTGATTTTTG TTGCGACATC ACCGCGTTGC GTCAACGTTG AACAGGCGCA GGAAGTGATG
GCTGCGGCAC CGTTGCAGTA TGTTGGCGTG TTCCGCAATC ACGATATTGC CGATGTGCTG
GACAAAGCTA AGGTGTTATC ACTGGTGGCA GTGCAACTGC ATGGTAATGA AGATCAGCTG
TATATCGATA CGCTGCGTGA AGCTCTGCCA GCACACGTTG CCATCTGGAA AGCATTAAGC
GTCGGTGAAA CCCTGCCCGC CCGCGAGCTT CAGCACGTTG ATAAATATGT TTTAGACAAC
GGCCAGGGTG GAAGCGGGCA ACGTTTCGAC TGGTCACTAT TAAATGGTCA ATCGCTTGGC
AACGTTCTGC TGGCGGGGGG CTTAGGCGCA GATAACTGCG TGGAAGCGGC ACAAACCGGC
TGCGCCGGAC TTGATTTTAA TTCTGCTGTA GAGTCGCAAC CGGGCATCAA AGACGCACGT
CTTTTGGCCT CGGTTTTCCA GACGCTGCGC GCATATTAA
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| Protein sequence | MQTVLAKIVA DKAIWVEARK QQQPLASFQN EVQPSTRHFY DALQGARTAF ILECKKASPS
KGVICDDFDP ARIAAIYKHY ASAISVLTDE KYFQGSFDFL PIVSQIAPQP ILCKDFIIDP
YQIYLARYYQ ADACLLMLSV LDDEQYRQLA AVAHSLKMGV LTEVSNEEEL ERAIALGAKV
VGINNRDLRD LSIDLNRTRE LAPKLGHNVT VISESGINTY AQVRELSHFA DGFLIGSALM
AHDDLHAAVR RVLLGENKVC GLTRGQDAKA AYDAGAIYGG LIFVATSPRC VNVEQAQEVM
AAAPLQYVGV FRNHDIADVL DKAKVLSLVA VQLHGNEDQL YIDTLREALP AHVAIWKALS
VGETLPAREL QHVDKYVLDN GQGGSGQRFD WSLLNGQSLG NVLLAGGLGA DNCVEAAQTG
CAGLDFNSAV ESQPGIKDAR LLASVFQTLR AY
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