| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1893 |
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| Symbol | trpB |
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| ID | 6971209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 1785256 |
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| End bp | 1786449 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643385827 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_002270316 |
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| Protein GI | 209396478 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.964383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.00187983 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAACAT TACTTAACCC CTATTTTGGT GAGTTTGGCG GCATGTACGT GCCACAAATC
CTGATGCCTG CTCTGCGCCA GCTGGAAGAA GCTTTTGTCA GCGCGCAAAA AGATCCTGAA
TTTCAGGCTC AGTTCAACGA CCTGCTGAAA AACTATGCCG GGCGTCCAAC CGCGCTGACC
AAATGCCAGA ACATTACGGC TGGCACGAAC ACCACGCTGT ATCTGAAGCG CGAAGATTTG
CTGCACGGCG GCGCGCATAA AACTAACCAG GTGCTCGGTC AGGCTTTACT GGCGAAGCGG
ATGGGTAAAA CCGAAATCAT CGCCGAAACC GGGGCCGGTC AGCATGGCGT GGCGTCGGCC
CTTGCCAGCG CCCTGCTCGG CCTGAAATGC CGTATTTATA TGGGGGCCAA AGACGTTGAA
CGCCAGTCGC CTAACGTTTT TCGTATGCGT TTAATGGGTG CGGAAGTGAT CCCGGTGCAT
AGCGGTTCCG CGACGCTGAA AGATGCCTGT AACGAGGCGC TGCGCGACTG GTCCGGCAGT
TATGAAACCG CGCACTATAT GCTGGGCACC GCAGCTGGCC CACATCCTTA TCCGACCATT
GTCCGTGAGT TTCAGCGGAT GATTGGCGAA GAAACCAAAG CACAGATTCT GGAAAGAGAA
GGTCGCCTGC CGGATGCCGT TATCGCCTGT GTTGGCGGCG GTTCGAATGC CATCGGCATG
TTTGCAGATT TCATCAACGA AACCAACGTC GGCCTGATTG GTGTGGAGCC TGGTGGTCAC
GGTATCGAAA CTGGCGAGCA CGGCGCACCG CTAAAACATG GTCGCGTGGG TATCTATTTC
GGTATGAAAG CGCCGATGAT GCAAACCGAA GACGGGCAGA TTGAAGAATC TTACTCCATC
TCCGCCGGAC TCGATTTTCC GTCCGTCGGC CCACAACACG CGTATCTTAA CAGCACTGGA
CGCGCTGATT ATGTGTCAAT TACCGATGAT GAAGCACTGG AAGCCTTCAA AACGCTGTGC
CTGCACGAAG GGATTATCCC GGCGCTGGAA TCCTCCCACG CCCTGGCCCA TGCGCTGAAA
ATGATGCGCG AAAACCCGGA AAAAGAGCAG CTACTGGTGG TTAACCTTTC CGGTCGCGGC
GATAAAGACA TCTTCACCGT TCACGATATT TTGAAAGCAC GAGGGGAAAT CTGA
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| Protein sequence | MTTLLNPYFG EFGGMYVPQI LMPALRQLEE AFVSAQKDPE FQAQFNDLLK NYAGRPTALT
KCQNITAGTN TTLYLKREDL LHGGAHKTNQ VLGQALLAKR MGKTEIIAET GAGQHGVASA
LASALLGLKC RIYMGAKDVE RQSPNVFRMR LMGAEVIPVH SGSATLKDAC NEALRDWSGS
YETAHYMLGT AAGPHPYPTI VREFQRMIGE ETKAQILERE GRLPDAVIAC VGGGSNAIGM
FADFINETNV GLIGVEPGGH GIETGEHGAP LKHGRVGIYF GMKAPMMQTE DGQIEESYSI
SAGLDFPSVG PQHAYLNSTG RADYVSITDD EALEAFKTLC LHEGIIPALE SSHALAHALK
MMRENPEKEQ LLVVNLSGRG DKDIFTVHDI LKARGEI
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