Gene ECH74115_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1875 
Symbol 
ID6968558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1772748 
End bp1773383 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content59% 
IMG OID643385811 
Producttail assembly protein 
Protein accessionYP_002270300 
Protein GI209396550 
COG category[R] General function prediction only 
COG ID[COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.14941 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATATCT CCGCAGAGCC GGAGGCGTAT TTTCGTATTG CGCCGGAAGA CTGGCTGCAG 
GCAGAGATGC AGGGGGAGAT TGTGGCGCTG GTTCACAGCC ACCCTGGTGG TCTGCCCTGG
CTGAGCGAGG CCGACCGGCG GCTGCAGATA AAGAGTGCCC TGCCCTGGTG GCTGGTCTGC
CGGGGGGAAA TTCACAAATT CCGCTGTGTG CCGCACCTGA CCGGGCGTCG TTTTGAGCAC
GGGGTGACGG ACTGTTACAC CCTGTTCCGG GATGCATACC ATCTGGCGGG GATAACGCTG
CCGGATTTTG TGCGTGAGGA TGACTGGTGG CGCAACGGTC AGAACCTTTA CCTGGACAAT
ATGGCGGCGA CTGGTTTTTA CCGGGTGCCC CTGTCCTCTG CACAGGCGGG CGATATCCTG
CTGTGCTGCT TTGGCGCATC GGTGGCCAAT CATGCCGCCA TATACTGCGG CAACGGTGAA
CTGCTTCACC ATCTGCCTGA ACAACTGAGT AAACGGGAGA GGTATTCTGA AAAATGGCAA
CGACGAACGC ATTCTGTCTG GCGTCACCGC CACTGGCACG CATCTGCCTT CACGGGGATT
TGCAACGATT TGGCCGCCGC CTCAGCCTGT ACGTGA
 
Protein sequence
MNISAEPEAY FRIAPEDWLQ AEMQGEIVAL VHSHPGGLPW LSEADRRLQI KSALPWWLVC 
RGEIHKFRCV PHLTGRRFEH GVTDCYTLFR DAYHLAGITL PDFVREDDWW RNGQNLYLDN
MAATGFYRVP LSSAQAGDIL LCCFGASVAN HAAIYCGNGE LLHHLPEQLS KRERYSEKWQ
RRTHSVWRHR HWHASAFTGI CNDLAAASAC T