| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1861 |
|---|
| Symbol | |
|---|
| ID | 6968173 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 1759857 |
|---|
| End bp | 1761980 |
|---|
| Gene Length | 2124 bp |
|---|
| Protein Length | 707 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643385797 |
|---|
| Product | phage terminase large subunit |
|---|
| Protein accession | YP_002270286 |
|---|
| Protein GI | 209398699 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5525] Bacteriophage tail assembly protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.000286067 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAATCAGG TGAACGAGAG CCATAGCCGC GCATCCGATA TCTGGCGCGA AGTGGCCTCG
CTGTTTCGCC CACCCAGCCG GTTACCAGTA GCGGAAGCCA TCAGGCGTTA TATGCGGGTT
CCACGGGGAG CCAATACTTC CGGTCCGTGG GAGTCATCGC TGACGCCCTA TATGATTGAC
CCCATTAATA CATTATCAGC CCGTGAATAT GACGCGGTGG TGTTTGTGGG ACCTGCGCGA
ACCGGGAAAA CCGAAGGGCT GATTGATGGC TGGATTGTGT ACGGCATCAT CTGTGATCCG
GCGGATATGC TGGTGGTGCA GATGACTGAG ACGAAGGCGC GTGAGCATTC CAGAACGCGT
CTTTCCAGGA CGTTTCGCCA CAGTCCGGAG GTCAGCAAGC GCCTCAGTCC TTCCCGTAAT
GACAACAACG TCCACGATAA AATGTTTCTT GACGGCTCCT TCCTGAAGAT TGGCTGGCCG
TCGATCACCG TCTTTTCCTC TTCGGATTAC CGTCGTGTGG CGCTGACGGA TTATGACCGT
TTCCCTGAAA ACGTGGACGG GGAAGGGGAT GCCTTCACGC TGGCCTCAAA GCGTACCACC
ACCTTTATGT CCTCGGGGAT GACCCTGGTC GAGAGTTCAC CGGGGCGGGA TATCACCGAT
ACCAAATGGC GTTGTGGTGG CGCACATGAG GCACCGCCAA CAACGGGGAT CCTGTCACTG
TATAACCGGG GAGACCGCCG CCGGTGGTAC TGGCCGTGTC CGCACTGCGG GGAATATTTT
CAGCCGGTGA TGGATAACAT GACCGGATAC CGGAATAACC CGGATTTTGT GGCTGCCGGT
CAGGCTGCCC GTCTGATGTG TCCGCATTGT CGCGGGCTGA TCGCCCCTGA GCAGAAACGC
GAACTGAATA ACCAGGGGAT CTGGCTTCGT GAAGGTGAAC GGGCGGCGGC GGACGGCAGT
ATCACCGGAA CGCCACGAAA CTCCCGGATT GCGTCATTTT GGATGGAGGG GCCAGCTGCG
GCGTTTCAGA CCTGGGAACA ACTGATTTTT AAACTGCTGG CGGCAGAAGA AGAGTATGAG
CGAACCGGCA GTGAAGAGAC CCTGAAAGCG GTGGTGAACA CCGATATCGG ACGACCCTAT
CTGCCCCGTT CAGCCACGGA ACAGCGTAAA AGTGAACTGC TTGAACAGCG TGCCGAGCCG
TTTCCCCGGC GATCTGTGCC GGATGGTGTG CGTTTTATTG AGGCAACGGT TGACGTACAG
GGCGGTAAAA ATCGCCGTTT TGTTGTGCAG ATCACCGGAT ACGGAGAGCA GGGGGAACGC
TGGATTGTTG ATCGCTACAA CATCCGGCAT TCACTGCGCT GCAGTCCCAA CGGTGAAAGT
CTGCCGGTTG ATCCGGCGGC ATATCCGGAG GACTGGGATT TGTTGCTGAC GGATGTGTTC
CATAAAACAT GGCCGCTGGC TTCTGATCCG GATGTGCGCA TGCGTCTGAT GGCCATGGCG
GTGGATACGG GAGGGGAAGC CGGGGTGACA GATAACGCCT ATCGTTTCTG GCGTCGTTGC
CGGAGTGACG GACTGGGCAA CAGGGTGTTT CTGTTCAAGG GGGATGGACT TCGCCGTGAC
AGGCTGATTA ACCGAACCTT CCCGGATAAT ACCGGCAGAA GTGCCCGCCG TGCCAGAGCC
AGTGGCGATG TCGCGCTGTG GCTGGTTCAG ACGGATGCGT TTAAGGATCG TGTAAATAAT
GCCCTGTGGC GTGACACACC AGGGCCGAAC TATATCCACT TTCCCGACTG GCTGGGGCGG
TGGTTTTACG ATGAGCTGAC CTATGAAGAG CGCGGCAGTG ACGGAAAATG GCGAAAACCG
GGCAGGGGCG CTAACGAAGC GTTTGACCTG CTGGTTTATG CGGATGCGCT TGCCGTTCTG
CATGGTTACG AAAAGATCCG CTGGCCCTCC GCACCGGACT GGGCACAGCG GGAAACGTGG
CTCGTCTTCC CGCAGGAGCG TTCTAGTGAA ACGGTATCCC CGGAACTGAC GGCCGGGGCA
GAAAAACGCC GTCGCCGGAA GAAAAAACTG TGGACGGAGC GTGCGGAAGA TAATCCATGG
ATAACATCAG GAGGCTGGTT GTGA
|
|---|
| Protein sequence | MNQVNESHSR ASDIWREVAS LFRPPSRLPV AEAIRRYMRV PRGANTSGPW ESSLTPYMID
PINTLSAREY DAVVFVGPAR TGKTEGLIDG WIVYGIICDP ADMLVVQMTE TKAREHSRTR
LSRTFRHSPE VSKRLSPSRN DNNVHDKMFL DGSFLKIGWP SITVFSSSDY RRVALTDYDR
FPENVDGEGD AFTLASKRTT TFMSSGMTLV ESSPGRDITD TKWRCGGAHE APPTTGILSL
YNRGDRRRWY WPCPHCGEYF QPVMDNMTGY RNNPDFVAAG QAARLMCPHC RGLIAPEQKR
ELNNQGIWLR EGERAAADGS ITGTPRNSRI ASFWMEGPAA AFQTWEQLIF KLLAAEEEYE
RTGSEETLKA VVNTDIGRPY LPRSATEQRK SELLEQRAEP FPRRSVPDGV RFIEATVDVQ
GGKNRRFVVQ ITGYGEQGER WIVDRYNIRH SLRCSPNGES LPVDPAAYPE DWDLLLTDVF
HKTWPLASDP DVRMRLMAMA VDTGGEAGVT DNAYRFWRRC RSDGLGNRVF LFKGDGLRRD
RLINRTFPDN TGRSARRARA SGDVALWLVQ TDAFKDRVNN ALWRDTPGPN YIHFPDWLGR
WFYDELTYEE RGSDGKWRKP GRGANEAFDL LVYADALAVL HGYEKIRWPS APDWAQRETW
LVFPQERSSE TVSPELTAGA EKRRRRKKKL WTERAEDNPW ITSGGWL
|
|---|
| |