Gene ECH74115_1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1858 
Symbol 
ID6967337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1757672 
End bp1758205 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content54% 
IMG OID643385794 
Productlysozyme 
Protein accessionYP_002270283 
Protein GI209395700 
COG category[R] General function prediction only 
COG ID[COG3772] Phage-related lysozyme (muraminidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.00000403604 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACACAA AAATCAAATA CGGCCTGTCG GCTGCCGTTC TGGCGCTGAT TGCCGCAGGT 
GCTTCTGCGC CTGAAATTCT CGACCAGTTT CTTGACGAAA AAGAAGGTAA CCACACCACG
GCATACCGTG ATGGTGCGGG TATCTGGACC ATCTGCCGTG GAGCCACCCG GGTGGATGGT
AAGCCTGTTA TTCCTGGCAT GAAGCTGTCG AAGGGGAAAT GCGACCGGGT TAACGCCATT
GAGCGTGATA AGGCGCTGGC ATGGGTGGAG AAAAACATCA AAGTGCCACT GACTGAACCC
CAGAAAGCGG GGATCGCGTC ATTCTGCCCG TATAACATTG GCCCCGGTAA GTGTTTCCCG
TCGACGTTTT ATAAACGAAT TAATGCAGGC GACCGCAGGG GAGCGTGTGA AGCGATTCGC
TGGTGGATTA AGGACGGAGG CAGAGACTGC CGTATCCGCT CAAATAATTG CTATGGTCAG
GTATCCCGTC GTGACCAGGA GAGCGCGCTG GCGTGCTGGG GTATCGACAG ATAA
 
Protein sequence
MNTKIKYGLS AAVLALIAAG ASAPEILDQF LDEKEGNHTT AYRDGAGIWT ICRGATRVDG 
KPVIPGMKLS KGKCDRVNAI ERDKALAWVE KNIKVPLTEP QKAGIASFCP YNIGPGKCFP
STFYKRINAG DRRGACEAIR WWIKDGGRDC RIRSNNCYGQ VSRRDQESAL ACWGIDR