Gene ECH74115_1833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1833 
Symbol 
ID6971999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1744154 
End bp1745194 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content50% 
IMG OID643385770 
Producthypothetical protein 
Protein accessionYP_002270260 
Protein GI209398708 
COG category[R] General function prediction only 
COG ID[COG5529] Pyocin large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000938078 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000000142087 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGTATCG ATGCACTACG ATGGGCTAAA AAGGTGAAAA CCGGCAGTTC ATCCAGTAAG 
TCTGTATTGA CCTGGCTTGC TGATATGTGC GGTGCCGATT TGTGTGCATA CCCGTCTGTA
TCTGCACTGG CAGAAGTAAC GGAACTGAAC AAAAAGACTG TGCAGGACAG CTTACGACAC
CTGATGGAGA TTGGGTTAAT TGTTGATACC GGTGAGAGAA AAGGCAGAAC AAAGCAAATT
GTGGTGTACC GACTTATCGG TGTAGAAGAA AGTGTTGCCG AGCCTGAATA CACCCAAAAA
CGGGTGTCTT TAAAGGTGGG TAAAATTGGT GCTGTTAATA AAAACAGTAC CGAAAACGGT
TATGTTTCAG CACAAAAGAG CCCCAAAAAC GGAACTCTTT GTTGCATGGA AAATAACCAA
AGACACCCAA ATTTTCCATC AAAGACACCC AAAAACGGAT CACGGAACCC AAAGGAACCC
AAAGATCTAA ACCCCACACA TAACGCACGC GAGAGTGCTC CGACCAGTGA GCAGGAAGTT
TTGTCGTTAC AGGCAGCCCC CCATGTATTC CTGGATGGCC TGAGCGAACC CATCGGAAAA
TTTCCGATGA CCGATAGCTG GTATCCGTCA CGGGATTTTC GACGACGGGC TGCGTTGTGG
GGGATGGCTT TGCCGGAGAC AGAATTTACA CCTGCTGAAC TTACCGCATT CCGGGACTAC
TGGGCAGCGG AGGGGAAAGT GTTTACGCAG ATTCAGTGGG AGCAGAAATT CGCCCGTCAC
GTAAATCACG TCAGGGCGCA GGTTAAACCA GTCAGCAAGG GGGTAAACCA TGCAGCAGCA
CCAGGTGGCA CCGCATCACG GGCAGTTCAG GAAATTCGGG CAGCACGTGA GCAGTGGGAA
CGTGAAAACG GATTTATCAG CGACGGAAAC GGCCTGGAAG CTGTGGGAAC TCATGGGGGA
GGTTTATTCG AACCGCTGGA CCCAGAAGAA CGGGGCCGCA CCTTCGAAGC TCTGGATTGC
ACAGATTGGC GCGATGACTG A
 
Protein sequence
MSIDALRWAK KVKTGSSSSK SVLTWLADMC GADLCAYPSV SALAEVTELN KKTVQDSLRH 
LMEIGLIVDT GERKGRTKQI VVYRLIGVEE SVAEPEYTQK RVSLKVGKIG AVNKNSTENG
YVSAQKSPKN GTLCCMENNQ RHPNFPSKTP KNGSRNPKEP KDLNPTHNAR ESAPTSEQEV
LSLQAAPHVF LDGLSEPIGK FPMTDSWYPS RDFRRRAALW GMALPETEFT PAELTAFRDY
WAAEGKVFTQ IQWEQKFARH VNHVRAQVKP VSKGVNHAAA PGGTASRAVQ EIRAAREQWE
RENGFISDGN GLEAVGTHGG GLFEPLDPEE RGRTFEALDC TDWRDD