Gene ECH74115_1783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1783 
Symbol 
ID6968357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1701848 
End bp1703773 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content54% 
IMG OID643385730 
Productphage terminase large subunit 
Protein accessionYP_002270220 
Protein GI209397875 
COG category[R] General function prediction only 
COG ID[COG5525] Bacteriophage tail assembly protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.0374719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATATAT CGAACAGTCA GATTGATATT CTGCGGCGTG ATGTACGCGC CGGGCTGCGA 
GCCCTGTTCA GGCCGGAGCC ACAGACTGCC GTTGAATGGG CGGATGCCAG TTACTATCTC
CCGAAAGAAT CCGCATACCA GGAAGGGCGC TGGGAAACAC TACCCTTTCA GCGGGCTATC
ATGAATGCGA TGGGCAGCGA CTACATCCGC GAGGTGAATG TGGTGAAGTC TGCCCGTGTT
GGTTATTCAA AAATGCTGCT GGGTGTTTAT GCCTACTTCA TAGAGCATAA GCAGCGTAAC
CCCCTTATCT GGTTGCCGAC GGATGGTGAT GCCGAGAACT TTATGAAAAC CCACGTCGAG
CCTACCATCC GCGATATTCC GTCGCTGCTG TCTCTGGCCC CGTGGTATGG CAAAAAGCAC
CGGGATAACA CGCTCACTAT GAAGCGTTTC ACCAATGGTC GTGGCTTCTG GTGCCTGGGC
GGTAAAGCGG CAAAAAACTA CCGTGAAAAG TCGGTTGATG TGGCGGGTTA TGATGAACTT
GCTGCCTTTG ATGAGGATAT TGAACAGGAA GGCTCTCCGA CGTTCCTGGG TGACAAGCGT
ATTGAAGGCT CGGTCTGGCC AAAGTCCATC CGTGGCTCCA CGCCCAAAGT GAGAGGCACC
TGCCAGATTG AGCGTGCAGC CAGTGAATCC CCGCATTTTA TGCGTTTTCA TGTTGCCTGC
CCGCACTGCG GGGAGGAGCA GTATCTTAAA TTTGGCGACA AAGAGACGCC GTTTGGCCTC
AAATGGACGC CGGATGACCC CTCCAGCGTG TTTTATCTCT GCGAGCATAA TGCCTGCGTC
ATCCGCCAGC AGGAGCTGGA CTTTACTGAT GCCCGTTATA TCTGCGAAAA GACCGGGATC
TGGACCCGTG ATGGCATTCT CTGGTTTTCG TCATCCGGTG AAGAGATTGA ACCGCCTGAC
AGTGTGACCT TTCACATCTG GACGGCGTAC AGCCCGTTCA CCACCTGGGT GCAGATTGTC
AAAGACTGGA TGAAGACGAA AGGGGATACG GGAAAACGTA AAACCTTCGT GAACACCACG
CTCGGTGAGA CGTGGGAAGC GAAAATCGGC GAACGTCCGG ATGCTGAAGT GATGGCAGAG
CGGAAAGAGT ATTATTCAGC GCCCGTTCCT GATCGTGTGG CTTACCTGAC CGCCGGTATC
GACTCCCAGC TGGACCGCTA CGAAATGCGC GTATGGGGAT GGGGGCCGGG TGAGGAAAGC
TGGCTGATTG ACCGGCAGAT TATTATGGGC CGCCACGACG ATGAACAGAC GCTGCTGCGT
GTGGATGAGG CCATCAATAA AACCTATACC CGCCGGAATG GTGCAGAAAT GTCGGTATCC
CGTATCTGCT GGGATACTGG CGGGATTGAC CCGACCATTG TGTATGAACG CTCGAAAAAA
CATGGGCTGT TCCGGGTGAT CCCCATTAAA GGGGCATCCG TCTACGGAAA GCCGGTGGCC
AGCATGCCAC GTAAGCGAAA CAAAAACGGG GTTTACCTTA CCGAAATCGG TACGGATACC
GCGAAAGAGC AGATTTATAA CCGCTTCACA CTGACGCCGG AAGGGGATGA ACCGCTTCCC
GGTGCCGTTC ACTTCCCGAA TAACCCGGAT ATTTTTGATC TTACCGAAGC GCAGCAACTG
ACTGCTGAAG AGCAGGTCGA AAAATGGGTG GATGGCAGGA AAAAAATACT GTGGGACAGC
AAAAAGCGAC GCAATGAGGC GCTCGACTGC TTCGTTTATG CGCTGGCGGC GCTGCGCATC
AGTATTTCCC GCTGGCAGCT GGATCTCAGT GCACTGCTGG CGAGCCTGCA GGAAGAGGAT
GGTGCAGCAA CCAACAAGAA AACACTGGCA GAATACGCCC GTGCCTTATC CGGAGAGGAT
GAATGA
 
Protein sequence
MNISNSQIDI LRRDVRAGLR ALFRPEPQTA VEWADASYYL PKESAYQEGR WETLPFQRAI 
MNAMGSDYIR EVNVVKSARV GYSKMLLGVY AYFIEHKQRN PLIWLPTDGD AENFMKTHVE
PTIRDIPSLL SLAPWYGKKH RDNTLTMKRF TNGRGFWCLG GKAAKNYREK SVDVAGYDEL
AAFDEDIEQE GSPTFLGDKR IEGSVWPKSI RGSTPKVRGT CQIERAASES PHFMRFHVAC
PHCGEEQYLK FGDKETPFGL KWTPDDPSSV FYLCEHNACV IRQQELDFTD ARYICEKTGI
WTRDGILWFS SSGEEIEPPD SVTFHIWTAY SPFTTWVQIV KDWMKTKGDT GKRKTFVNTT
LGETWEAKIG ERPDAEVMAE RKEYYSAPVP DRVAYLTAGI DSQLDRYEMR VWGWGPGEES
WLIDRQIIMG RHDDEQTLLR VDEAINKTYT RRNGAEMSVS RICWDTGGID PTIVYERSKK
HGLFRVIPIK GASVYGKPVA SMPRKRNKNG VYLTEIGTDT AKEQIYNRFT LTPEGDEPLP
GAVHFPNNPD IFDLTEAQQL TAEEQVEKWV DGRKKILWDS KKRRNEALDC FVYALAALRI
SISRWQLDLS ALLASLQEED GAATNKKTLA EYARALSGED E