| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1739 |
|---|
| Symbol | tonB |
|---|
| ID | 6967035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 1675430 |
|---|
| End bp | 1676149 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643385692 |
|---|
| Product | transport protein TonB |
|---|
| Protein accession | YP_002270184 |
|---|
| Protein GI | 209396499 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000184106 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.00504823 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTTG ATTTACCTCG CCGCTTCCCC TGGCCGACGT TACTTTCGGT CTGCATTCAT
GGTGCTGTTG TGGCGGGTCT GCTCTATACC TCGGTACATC AGGTTATTGA ACTACCTGCG
CCTGCGCAGC CGATTTCTGT CACGATGGTT GCGCCTGCTG ATCTCGAACC GCCACAAGCC
GTTCAGCCGC CACCGGAGCC GGTGGTAGAG CCAGAACCGG AACCTGAGCC GATCCCCGAA
CCGCCAAAAG AAGCACCGGT GGTCATTGAA AAGCCGAAGC CGAAACCTAA GCCAAAACCG
AAGCCGGTGA AAAAGGTACA GGAGCAGCAA AAACGCGATG TCAAACCCGT AGAGTCGCGT
CCGGCATCAC CGTTTGAAAA TACGGCACCG GCACGCCCGA CATCAAGTAC AGCAACGGCT
GCAACCAGCA AGCCGGTTAC CAGTGTGGCT TCAGGACCAC GCGCATTAAG CCGTAATCAG
CCGCAGTATC CGGCACGAGC ACAGGCATTG CGCATTGAAG GGCAGGTTAA AGTTAAATTT
GACGTCACGC CGGATGGTCG CGTGGATAAC GTACAAATCC TCTCAGCCAA GCCTGCGAAC
ATGTTTGAGC GTGAGGTGAA AAATGCGATG CGCAGATGGC GTTATGAGCC GGGTAAGCCA
GGCAGTGGGA TTGTGGTGAA TATCCTGTTT AAAATTAACG GCACCACCGA AATTCAGTAA
|
|---|
| Protein sequence | MTLDLPRRFP WPTLLSVCIH GAVVAGLLYT SVHQVIELPA PAQPISVTMV APADLEPPQA
VQPPPEPVVE PEPEPEPIPE PPKEAPVVIE KPKPKPKPKP KPVKKVQEQQ KRDVKPVESR
PASPFENTAP ARPTSSTATA ATSKPVTSVA SGPRALSRNQ PQYPARAQAL RIEGQVKVKF
DVTPDGRVDN VQILSAKPAN MFEREVKNAM RRWRYEPGKP GSGIVVNILF KINGTTEIQ
|
|---|
| |