Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_1707 |
Symbol | narK |
ID | 6972216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 1644799 |
End bp | 1646190 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643385664 |
Product | nitrite extrusion protein 1 |
Protein accession | YP_002270158 |
Protein GI | 209400219 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2223] Nitrate/nitrite transporter |
TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0135678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCACT CATCCGCCCC CGAAAGGGCT ACTGGAGCTG TCATTACAGA TTGGCGACCG GAAGATCCTG CGTTCTGGCA ACAACGCGGT CAACGTATTG CCAGCCGCAA CCTGTGGATT TCCGTTCCCT GTCTGCTGCT GGCGTTTTGC GTATGGATGT TGTTCAGCGC TGTTGCGGTG AACTTACCGA AAGTCGGTTT TAATTTTACG ACCGATCAGC TATTTATGTT GACTGCGTTG CCTTCGGTTT CTGGCGCGTT ATTACGTGTT CCATACTCCT TTATGGTTCC TATCTTCGGT GGTCGTCGCT GGACGGCGTT CAGCACCGGT ATTCTGATTA TTCCTTGTGT CTGGCTGGGT TTTGCCGTGC AGGATACCTC CACGCCTTAT AGCGTCTTCA TCATCATCTC TCTGCTGTGC GGCTTTGCTG GCGCGAACTT CGCATCCAGT ATGGCAAACA TCAGCTTCTT CTTTCCGAAA CAGAAGCAGG GTGGCGCGCT GGGCCTGAAT GGTGGTCTGG GCAACATGGG CGTTAGCGTT ATGCAGTTGG TTGCTCCGCT GGTGGTATCA CTGTCGATTT TCGCAGTATT TGGTAGCCAG GGCGTCAAAC AGCCGGATGG GACTGAGCTG TATCTGGCGA ATGCGTCCTG GATATGGGTG CCGTTCCTTG CCATCTTCAC CATTGCGGCG TGGTTTGGCA TGAACGATCT TGCTACCTCG AAAGCCTCCA TCAAGGAGCA GTTGCCGGTA CTCAAACGGG GTCATCTGTG GATTATGAGC CTGCTGTATC TGGCAACCTT CGGTTCCTTC ATCGGCTTCT CCGCGGGCTT TGCGATGCTG TCAAAAACGC AGTTCCCGGA TGTTCAGATT CTGCAATACG CTTTCTTCGG GCCGTTTATT GGTGCGCTGG CGCGTTCTGC AGGTGGTGCA TTATCTGACC GTCTGGGCGG AACTCGTGTC ACGCTGGTGA ACTTTATTCT GATGGCGATT TTCAGCGGCC TGCTGTTCCT GACCTTACCG ACTGACGGGC AGGGCGGAAG CTTCATGGCG TTCTTCGCGG TCTTCCTGGC GCTGTTCCTG ACAGCTGGGC TGGGTAGTGG TTCCACTTTC CAGATGATTT CCGTGATCTT CCGTAAACTG ACAATGGATC GCGTGAAAGC AGAAGGGGGT TCTGACGAAC GTGCGATGCG TGAAGCGGCA ACCGACACGG CGGCGGCGTT GGGTTTCATC TCTGCGATTG GCGCGATTGG TGGCTTCTTT ATCCCGAAAG CGTTCGGTAG CTCGCTGGCA TTAACGGGTT CGCCAGTCGG CGCAATGAAA GTATTTTTGA TTTTCTATAT CGCCTGCGTA GTGATTACCT GGGCGGTATA TGGTCGGCAT TCTAAAAAAT AA
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Protein sequence | MSHSSAPERA TGAVITDWRP EDPAFWQQRG QRIASRNLWI SVPCLLLAFC VWMLFSAVAV NLPKVGFNFT TDQLFMLTAL PSVSGALLRV PYSFMVPIFG GRRWTAFSTG ILIIPCVWLG FAVQDTSTPY SVFIIISLLC GFAGANFASS MANISFFFPK QKQGGALGLN GGLGNMGVSV MQLVAPLVVS LSIFAVFGSQ GVKQPDGTEL YLANASWIWV PFLAIFTIAA WFGMNDLATS KASIKEQLPV LKRGHLWIMS LLYLATFGSF IGFSAGFAML SKTQFPDVQI LQYAFFGPFI GALARSAGGA LSDRLGGTRV TLVNFILMAI FSGLLFLTLP TDGQGGSFMA FFAVFLALFL TAGLGSGSTF QMISVIFRKL TMDRVKAEGG SDERAMREAA TDTAAALGFI SAIGAIGGFF IPKAFGSSLA LTGSPVGAMK VFLIFYIACV VITWAVYGRH SKK
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