| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1679 |
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| Symbol | ldcA |
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| ID | 6968175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 1620361 |
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| End bp | 1621275 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643385638 |
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| Product | L,D-carboxypeptidase A |
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| Protein accession | YP_002270132 |
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| Protein GI | 209397773 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000833472 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.396498 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTCTGT TTCACTTAAT TGCCCCATCG GGTTACTGCA TTAAACAGCA CGCCGCGCTG
CGTGGTATCC AGCGCCTTAC CGACGCGGGG CATCAAGTCA ATAACGTCGA GGTTATTGCC
CGTCGTTGTG AGCGTTTTGC GGGTACGGAA ACGGAGCGTC TGGAAGATCT CAATTCCCTT
GCCAGACTGA CTACCCCCAA CACCATCGTG CTGGCTGTAC GCGGCGGTTA CGGTGCCAGT
CGTTTACTGG CAGATATTGA CTGGCAGGCA CTGGTGGCTC GCCAACAATA TGACCCGTTG
CTCATATGCG GGCATAGCGA TTTTACCGCC ATTCAGTGCG GTCTTCTGGC GCAAGGCAAT
GTCATCACCT TTAGCGGCCC CATGCTGGTA GCAAACTTTG GCGCGGATGA ACTGAACACC
TTTACCGAGC ACCATTTCTG GCTGGCGTTA CGCAATGAAA CCTTTACCAT TGAATGGCAA
GGGGAAGGCC CGACATGTCG GGCCGAAGGC ACGTTGTGGG GAGGCAATCT TGCGATGCTG
ATTTCACTGA TCGGTACACC GTGGATGCCA AAAATTGAGA ACGGTATTCT GGTGCTGGAA
GATATTAACG AGCACCCTTT CCGCGTCGAA CGTATGCTGT TGCAGCTCTA TCATGCGGGA
ATTTTGCCAC GTCAGAAGGC GATTATTCTC GGTAGCTTTA GCGGCAGTAC GCCTAATGAT
TATGACGCAG GTTACAACCT GGAGTCAGTG TACGCATTTT TGCGTTCCCG CCTGTCGATT
CCACTCATTA CCGGCCTCGA TTTTGGTCAT GAACAACGCA CGGTTACGCT GCCGTTGGGC
GCACATGCCA TTCTTACTAA CACCCGGGAA GGCACTCAGT TGACGATTAG CGGTCATCCT
GTTCTTAAAA TGTAA
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| Protein sequence | MSLFHLIAPS GYCIKQHAAL RGIQRLTDAG HQVNNVEVIA RRCERFAGTE TERLEDLNSL
ARLTTPNTIV LAVRGGYGAS RLLADIDWQA LVARQQYDPL LICGHSDFTA IQCGLLAQGN
VITFSGPMLV ANFGADELNT FTEHHFWLAL RNETFTIEWQ GEGPTCRAEG TLWGGNLAML
ISLIGTPWMP KIENGILVLE DINEHPFRVE RMLLQLYHAG ILPRQKAIIL GSFSGSTPND
YDAGYNLESV YAFLRSRLSI PLITGLDFGH EQRTVTLPLG AHAILTNTRE GTQLTISGHP
VLKM
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