Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_1676 |
Symbol | dadA |
ID | 6967855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 1615756 |
End bp | 1617060 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643385635 |
Product | D-amino acid dehydrogenase small subunit |
Protein accession | YP_002270129 |
Protein GI | 209395760 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000458622 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTATGC GAGTTGTCAT ACTGGGAAGT GGTGTGGTAG GCGTTGCCAG CGCCTGGTAC TTAAATCAGG CAGGACATGA GGTCACCGTC ATTGATCGGG AGCCGGGGGC CGCCCTGGAA ACCAGTGCCG CGAATGCCGG GCAAATCTCC CCCGGATATG CTGCACCGTG GGCGGCACCA GGTGTGCCTT TAAAAGCGAT TAAATGGATG TTCCAGCGCC ATGCGCCGCT GGCGGTTCGT CTCGACGGTA CGCAGTTCCA GTTGAAATGG ATGTGGCAAA TGTTACGTAA CTGCGACACC AGCCACTACA TGGAAAACAA AGGGCGGATG GTGCGTCTGG CGGAATACAG CCGTGATTGC CTGAAAGCAT TGCGCGCCGA AACCAATATT CAGTATGAAG GGCGTCAGGG TGGGACGCTG CAACTGTTCC GTACCGAACA ACAGTATGAA AATGCGACCC GCGATATCGC CGTGCTGGAA GATGCCGGCG TACCGTATCA GCTGCTGGAA TCCAGCCGCC TGGCGGAAGT GGAGCCCGCG CTGGCAGAAG TAGCGCACAA ACTGACGGGT GGTCTGCAAT TGCCCAATGA TGAAACCGGA GACTGCCAGC TGTTTACCCA GAATCTGGCG CGGATGGCGG AGCAGGCGGG GGTTAAATTC CGCTTTAATA CGCCCGTTGA CCAACTGCTT TGCGACGGCG AGCAAATCTA CGGCGTGAAG TGTGGCGATG AAGTGATTAA GGCCGATGCG TATGTGATGG CGTTTGGTTC TTACTCGACG GCGATGCTCA AAGGCATTGT TGATATTCCG GTGTATCCGC TGAAAGGCTA CTCGCTGACC ATTCCAATTG CGCAGGAAGA TGGTGCGCCG GTATCCACCA TTCTTGATGA AACCTACAAA ATCGCCATTA CCCGTTTCGA TAACCGCATT CGTGTTGGCG GAATGGCGGA AATTGTTGGT TTTAATACCG AGCTGTTGCA ACCGCGTCGT GAAACGCTGG AGATGGTGGT TCGCGATCTC TATCCACGCG GCGGTCATGT CGAGCAGGCG ACTTTCTGGA CGGGTCTGCG CCCGATGACG CCAGACGGCA CGCCGGTTGT CGGGCGTACA CGCTTTAAAA ATCTGTGGCT AAATACCGGT CACGGCACGC TCGGCTGGAC GATGGCTTGC GGTTCCGGTC AGTTGTTAAG CGATCTGCTC TCTGGTCGCA CGCCAGCGAT CCCATATGAG GATCTAAGCG TAGCGCGCTA CAGCCGTGGA TTTACGCCAT CACGTCCGGG CCATTTACAT GGCGCACACA GCTAA
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Protein sequence | MAMRVVILGS GVVGVASAWY LNQAGHEVTV IDREPGAALE TSAANAGQIS PGYAAPWAAP GVPLKAIKWM FQRHAPLAVR LDGTQFQLKW MWQMLRNCDT SHYMENKGRM VRLAEYSRDC LKALRAETNI QYEGRQGGTL QLFRTEQQYE NATRDIAVLE DAGVPYQLLE SSRLAEVEPA LAEVAHKLTG GLQLPNDETG DCQLFTQNLA RMAEQAGVKF RFNTPVDQLL CDGEQIYGVK CGDEVIKADA YVMAFGSYST AMLKGIVDIP VYPLKGYSLT IPIAQEDGAP VSTILDETYK IAITRFDNRI RVGGMAEIVG FNTELLQPRR ETLEMVVRDL YPRGGHVEQA TFWTGLRPMT PDGTPVVGRT RFKNLWLNTG HGTLGWTMAC GSGQLLSDLL SGRTPAIPYE DLSVARYSRG FTPSRPGHLH GAHS
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