Gene ECH74115_1671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1671 
SymbolumuC 
ID6972022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1609343 
End bp1610611 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content51% 
IMG OID643385630 
ProductDNA polymerase V subunit UmuC 
Protein accessionYP_002270124 
Protein GI209400560 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0525212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGCCC TCTGTGATGT AAACGCGTTT TATGCCAGCT GTGAGACGGT GTTTCGCCCT 
GAGTTATGGG GTAAACCGGT GGTTGTGCTA TCGAATAATG ACGGTTGCGT TATCGCCCGA
AACGCTGAGG CAAAGGCGCT TGGCGTTAAA ATGGGCGATC CCTGGTTCAA ACAAAAAGAT
CTGTTTCGTC GCTGTGGCGT GGTTTGCTTT AGCAGCAATT ATGAGCTTTA CGCAGACATG
AGCAATCGGG TGATGTCGAC GCTGGAAGAA CTATCGCCCC GCGTCGAGAT TTACAGTATT
GATGAGGCAT TCTGCGATCT GACAGGTGTG CGTAATTGTC GCGATCTGAC TGACTTTGGC
AGAGAAATTC GCGCAACGGT GCTACAACGT ACCCATCTTA CTGTTGGTGT GGGGATCGCC
CAGACCAAAA CGCTGGCTAA GCTTGCCAAT CATGCGGCAA AAAAATGGCA GCGGCAGACG
GGTGGGGTGG TGGATTTATC AAATCTGGAA CGCCAGCGTA AATTAATGTC TGCTCTCCCC
GTGGATGACG TCTGGGGGAT TGGACGGCGG ATCAGCAAAA AACTGGACGC GATGGGGATC
AAAACCGTTC TCGATTTGGC GGATACAGAT ATCCGGTTTA TCCGTAAACA TTTTAATGTC
GTGCTCGAAA GAACGGTGCG TGAACTGCGC GGTGAACCCT GTTTGCAACT GGAAGAATTT
GCACCGACAA AGCAGGAAAT TATCTGTTCC CGCTCGTTTG GTGAACGCAT CACGGATTAT
ACGTCGATGC GGCAGGCCAT TTGTAGTTAC GCTGCCCGGG CGGCGGAAAA ACTTCGCAGT
GAGCATCAAT ATTGTCGGTT TATCTCCACA TTTATTAAGA CGTCACCATT TGCGCTCAAT
GAACCTTATT ACGGCAATAG CGCGTCGGTA AAACTGCTGA CGCCCACTCA GGACAGCAGG
GATATCATTA ACGCCGCTAC GCGATCTCTG GATGCCATCT GGCAAGCGGG CCATCGCTAC
CAAAAAGCGG GCGTGATGCT GGGGGATTTC TTCAGTCAGG GAGTCGCGCA GCTCAATTTA
TTCGATGACA ACGCTCCGCG CCCCGGGAGT GAGCAATTGA TGGCGGTAAT GGATACACTG
AATGCTAAAG AGGGCAGAGG AACACTCTAT TTTGCCGGGC AGGGGATCCA GCAACAATGG
CAGATGAAGC GAGCCATGCT TTCACCACGT TATACAACGC GAAGTTCTGA TTTACTGCGG
GTCAAATAA
 
Protein sequence
MFALCDVNAF YASCETVFRP ELWGKPVVVL SNNDGCVIAR NAEAKALGVK MGDPWFKQKD 
LFRRCGVVCF SSNYELYADM SNRVMSTLEE LSPRVEIYSI DEAFCDLTGV RNCRDLTDFG
REIRATVLQR THLTVGVGIA QTKTLAKLAN HAAKKWQRQT GGVVDLSNLE RQRKLMSALP
VDDVWGIGRR ISKKLDAMGI KTVLDLADTD IRFIRKHFNV VLERTVRELR GEPCLQLEEF
APTKQEIICS RSFGERITDY TSMRQAICSY AARAAEKLRS EHQYCRFIST FIKTSPFALN
EPYYGNSASV KLLTPTQDSR DIINAATRSL DAIWQAGHRY QKAGVMLGDF FSQGVAQLNL
FDDNAPRPGS EQLMAVMDTL NAKEGRGTLY FAGQGIQQQW QMKRAMLSPR YTTRSSDLLR
VK