Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_1655 |
Symbol | |
ID | 6966928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 1599300 |
End bp | 1599884 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643385615 |
Product | helix-turn-helix domain protein |
Protein accession | YP_002270109 |
Protein GI | 209396624 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000652652 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAAAA GAGCTAAAAA TCAGATAGTC GATAGCGATA TTGCACGTTT GTTACTCAAG CTCAGAAAGT CTCGAAACTT GACTGTTACA GAGCTTGCCC AACGATCTGG TGTCAGTCAG GCGATGATCA GCAAAGTTGA ACGAGGCACT TCAAGCCCCA GTGCAACAAT ACTTAGTCGG TTAGCTAATG CACTGAATAT TACGCTATCA AAGCTTTTTG CAGAGCTTGA GATGCAACAG AATTCACTTG TACTTTTGGC TGACCAGCAA CAACATTGGA TTGATGAAGA AACAGGCATT ACCCGCTGGT CTTTGTCCCC AGCGGGTGCA TGTCCGGAAC TAATAAAAGT TGAAATCCCC CCTATGGGGC AATTGACTAT CCCTGCCTCT GCAAATGAGC ATCTTTCTGG ACAAACTCTA TGGATGTTAA GCGGCAGCCT TGATTTTCGA GTCAATCATC AGACTCATCA TTTACAAGCC GGTGATTGTC TTGCTCTTAC CTTTGCCAGC GAGTACCAAA TGAGAAACCC AGATAGCGGC CAGAGTTGTT CTTACATTGT CGCTTTCAGC CAAAAAAATC CATGA
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Protein sequence | MDKRAKNQIV DSDIARLLLK LRKSRNLTVT ELAQRSGVSQ AMISKVERGT SSPSATILSR LANALNITLS KLFAELEMQQ NSLVLLADQQ QHWIDEETGI TRWSLSPAGA CPELIKVEIP PMGQLTIPAS ANEHLSGQTL WMLSGSLDFR VNHQTHHLQA GDCLALTFAS EYQMRNPDSG QSCSYIVAFS QKNP
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