Gene ECH74115_1644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1644 
Symbol 
ID6971644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1589101 
End bp1589682 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content47% 
IMG OID643385604 
Producttail fiber assembly protein 
Protein accessionYP_002270098 
Protein GI209398519 
COG category[R] General function prediction only 
COG ID[COG5525] Bacteriophage tail assembly protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCA GAATGAGTGA ACAACCACGG ACCATAAAAA TTTATAATCT GCTGACCGGA 
ACTAATGAAT TTATTGGTGA AGGTGACGCA TATATTCCGC CTCATACAGG TCTGCCAGCA
AACAGTACCT ATATTGCACC GCCAGATATT CCGGCTGGCT TCGTGGCTGT TTTCAACAGT
GATGAGTCAT CGTGGCATCT CGTTGAAGAT CATCGGGGTA AAACGGTTTA TGACGTGGCT
TCCGGCGACG CGTTATTTAT TTCTGAACTC GGCTCATTAC CGGAAAATGT TACCTGGTTA
TCGCCGGAAG GGGAGTTTCA GAAGTGGAAC GGCACAGCCT GGGTGAAAGA TGCAGAAGCA
GAAAAACTGT TCCGGATCCG GGAGGCGGAA GAAACAAAAA ACAGCCTGAT GCAGGTAGCC
AGTGAGCATA TTGCGCCACT TCAGGATGCT GTAGATCTGG AAATCGCAAC GGAGGAAGAA
ACCTCATTGC TGGAAGCCTG GAAAAAGTAT CGGGTGTTGC TGAACCGTGT TGATACATCA
ACTGCACCTG ATATTGAGTG GCCTGTAATA CCTGAAGTTT AA
 
Protein sequence
MAFRMSEQPR TIKIYNLLTG TNEFIGEGDA YIPPHTGLPA NSTYIAPPDI PAGFVAVFNS 
DESSWHLVED HRGKTVYDVA SGDALFISEL GSLPENVTWL SPEGEFQKWN GTAWVKDAEA
EKLFRIREAE ETKNSLMQVA SEHIAPLQDA VDLEIATEEE TSLLEAWKKY RVLLNRVDTS
TAPDIEWPVI PEV