| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1643 |
|---|
| Symbol | |
|---|
| ID | 6970828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 1587551 |
|---|
| End bp | 1589101 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643385603 |
|---|
| Product | prophage tail fibre domain protein |
|---|
| Protein accession | YP_002270097 |
|---|
| Protein GI | 209400441 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5301] Phage-related tail fibre protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGCTTG AGGATGCGAG CACGACGAAA AAGGGGATAG TACAGCTCAG CAGTGCGACT
AACAGCACTT CCGAGTCACT GGCGGCAACG CCAAAAGCCG TTAAGGCCGC GTATGAGCTG
GCTAACGGGA AATACACCGC ACAGGATGCA ACGACAGCAC AGAAAGGGAT AGTTCAGCTT
AGCAACGCGA CCAACAGCAC ATCTGAAATG CTGGCGGCAA CGCCAAAGTC GGTAAAGGCA
GCCTATGACC TTGCTAACGG GAAATATACT GCTCAGGACG CTACGACAGC ACAAAAAGGA
ATTGTCCAGC TCAGTAGTGC AACCAACAGC GCATCTGAAA CGCTTGCCGC GACACCGAAA
GCAGTGAAAG CAGCTAATGA TAATGCGAAT GGTCGGGTAC CTTCTGCCCG TAAGGTGAAT
GGTAAGGCGC TTTCATCGGA TATAACACTG ACGCCGAAAG ATATTGGTAC GCTTAACTCA
ACAACAATGT CATTCAGCGG TGGTGCTGGT TGGTTCAAAT TAGCAACGGT AACCATGCCA
CAGGCGAGTT CTGTTGTTTC AATTACGTTG ATTGGTGGCG CGGGATTTAA CGTGGGGTCA
CCTCAACAGG CAGGTATATC TGAACTTGTT TTGCGTGCAG GTAATGGTAA TCCGAAGGGG
ATTACTGGTG CTTTATGGCA GCGCACATCG ACAGGGTTTA CAAATTTTGC CTGGGTCAAT
ACATCTGGTG ATACTTACGA TATTTACGTT GCAATCGGAA ATTATGCGAC TGGTGTAAAT
ATTCAATGGG ATTATACCAG TAATGCCAGC GTGACGATTC ATACGTCACC AGCATATTCT
GCTAATAAGC CGGAAGGGTT AACGGACGGT ACAGTTTATT CACTCTATAC GCCATCAGAG
CAGTTTTATC CGCCTGGCGC ACCAATCCCG TGGCCATCAG ATACCGTTCC GTCTGGCTAT
GCCCTGATGC AGGGGCAGAC TTTTGACAAA TCTGCATACC CGAAACTTGC AGCCGCTTAT
CCGTCAGGCG TGATCCCTGA TATGCGTGGC TGGACGATTA AGGGCAAACC TGCCAGTGGT
CGGGCCGTAT TGTCTCAGGA ACAGGACGGC ATTAAATCGC ACACCCACAG CGCCAGCGCA
TCCAGTACGG ATTTGGGGAC GAAAACCACA TCGTCGTTTG ATTACGGCAC TAAATCCACG
AATAACACCG GGGCGCACAC GCACAGTGTG AGCGGTACAG CCGCAAGTGC CGGAAACCAT
ACTCATAGTG TCACAGGCGC ATCAGCAGTC AGCCAGTGGT CACAAAATGG GTCAGTACAT
AAGGTAGTGT CTGCGGCCAG TGTGAATACA AGTGCTGCAG GAGCGCACAC TCATAGTGTC
AGCGGCACAG CTGCATCTGC AGGTGCTCAC GCACATACTG TCGGTATTGG TGCTCATACG
CACTCTGTTG CGATTGGCTC ACATGGACAC ACCATCACCG TTAACGCTGC GGGTAACGCG
GAAAACACTG TCAAAAACAT CGCATTTAAC TACATTGTGA GGCTTGCATA A
|
|---|
| Protein sequence | MALEDASTTK KGIVQLSSAT NSTSESLAAT PKAVKAAYEL ANGKYTAQDA TTAQKGIVQL
SNATNSTSEM LAATPKSVKA AYDLANGKYT AQDATTAQKG IVQLSSATNS ASETLAATPK
AVKAANDNAN GRVPSARKVN GKALSSDITL TPKDIGTLNS TTMSFSGGAG WFKLATVTMP
QASSVVSITL IGGAGFNVGS PQQAGISELV LRAGNGNPKG ITGALWQRTS TGFTNFAWVN
TSGDTYDIYV AIGNYATGVN IQWDYTSNAS VTIHTSPAYS ANKPEGLTDG TVYSLYTPSE
QFYPPGAPIP WPSDTVPSGY ALMQGQTFDK SAYPKLAAAY PSGVIPDMRG WTIKGKPASG
RAVLSQEQDG IKSHTHSASA SSTDLGTKTT SSFDYGTKST NNTGAHTHSV SGTAASAGNH
THSVTGASAV SQWSQNGSVH KVVSAASVNT SAAGAHTHSV SGTAASAGAH AHTVGIGAHT
HSVAIGSHGH TITVNAAGNA ENTVKNIAFN YIVRLA
|
|---|
| |