| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1623 |
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| Symbol | |
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| ID | 6969781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 1570981 |
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| End bp | 1572300 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643385583 |
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| Product | minor capsid protein C |
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| Protein accession | YP_002270077 |
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| Protein GI | 209398131 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.0216288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAGCAG AGCTGCGTAA TCTCCCGCAT ATTGCCAGCA TGGCTTTTAA TGAGCCGCTG
ATGCTTGAAC CCGCCTATGC GCGGGTTTTC TTTTGTGCGC TTGCAGGCCA GCTTGGGATC
AGCCGCCTGA CGGATGCAGT ATCCGGCGAC AGCCTGACTG CCGGAGAGGC ACCCGCGGCG
CTGGCGTTAT CCGGTGATGA TGACGGACCA CGACAGGCCC GGAGTTATCA GGTCATGAAC
GGCATCGCCG TGCTGCCGGT GTCCGGTACG CTGGTCAGCC GGACGCGGGC GCTGCAGCCG
TATTCGGGAA TGACCGGTTA CAACGGCATT ATCGCCCGTC TGCAACAGGC TGCCAGCGAT
CCGATGGTGG ACGGCATTCT GCTCGATATG GACACACCGG GCGGGATGGT GGCGGGAGCA
TTTGACTGTG CTGACATCAT CGCCCGTGTG CGAGACATAA AACCGGTATG GGCGCTGGCC
AACGACATGA ACTGCAGTGC AGGTCAGCTG CTTGCCAGCG CCGCCTCCCG GCGTCTGGTC
ACGCAGACCG CCCGGACAGG CTCCATCGGC GTCATGATGG CTCACAGTAA TTACGGTGCT
GCCCTGGAGA AACAGGGCGT GGAAATCACG CTGATTTACA GCGGCAGCCA TAAGGTGGAT
GGCAACCCCT ACAGCCATCT ACCGGGTGAT GTCCGGGAAA CACTGCAGTC CCGGATGGAT
GCAACCCGCC GGATGTTTGC GCAGAAGGTG TCGGCATATA CCGGCCTGTC CGTGCAGGCT
GTGCTGGATA CCGAGGCTGC AGTGTACAGC GGTCAGGAGG CCATTGATGC CGGACTGGCT
GATGAACTTG TCAACAGCAC CGATGCGATC ACCGTTATGC GTGATGCACT GGATGCACGT
AAATCCCGTC TCTCAGGAGG GCGAATGACC AAAGAGACTC AATCAACAAC TGTTTCAGCC
ACTGCTTCGC AGGCTGACGT TACTGGCGTG GTGCCAGCGA CGGAGGGCGA AAACGCCAGC
GCGGCGCAGC CGGACGTGAA CGCGCAGATC ACCGCTGCGG TTGCGGCAGA AAACAGCCGC
ATTATGGGGA TCCTCAACTG TGAGGAGGCT CACGGACGCG AAGAACAGGC CCGCGTGCTG
GCAGAAACCC CCGGTATGAC CGTGGAAACG GCCCGCCGCA TTCTGGCCGC AGCACCACAG
AGTGCACAGG CGCGCAGTGA TACTGCGCTG GATCGTCTGA TGCAGGGGGC ACCGGCACCG
CTGGCTGCAG GTAACCCGGC ATCTGATGCC GTTAACGATT TGCTGAACAC ACCAGTGTAA
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| Protein sequence | MTAELRNLPH IASMAFNEPL MLEPAYARVF FCALAGQLGI SRLTDAVSGD SLTAGEAPAA
LALSGDDDGP RQARSYQVMN GIAVLPVSGT LVSRTRALQP YSGMTGYNGI IARLQQAASD
PMVDGILLDM DTPGGMVAGA FDCADIIARV RDIKPVWALA NDMNCSAGQL LASAASRRLV
TQTARTGSIG VMMAHSNYGA ALEKQGVEIT LIYSGSHKVD GNPYSHLPGD VRETLQSRMD
ATRRMFAQKV SAYTGLSVQA VLDTEAAVYS GQEAIDAGLA DELVNSTDAI TVMRDALDAR
KSRLSGGRMT KETQSTTVSA TASQADVTGV VPATEGENAS AAQPDVNAQI TAAVAAENSR
IMGILNCEEA HGREEQARVL AETPGMTVET ARRILAAAPQ SAQARSDTAL DRLMQGAPAP
LAAGNPASDA VNDLLNTPV
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