Gene ECH74115_1620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1620 
Symbol 
ID6968568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1567274 
End bp1569199 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content54% 
IMG OID643385580 
Productphage terminase large subunit 
Protein accessionYP_002270074 
Protein GI209398443 
COG category[R] General function prediction only 
COG ID[COG5525] Bacteriophage tail assembly protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0047658 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAATATAT CGAACAGTCA GGTTAACAGG CTGCGGCATT TTGTCCGCGC CGGGCTTCGC 
TCACTGTTCA GGCCGGAGCC ACAGACCGCC GTTGAATGGG CGGATGCCAG TTACTATCTC
CCGAAAGAAT CCGCATACCA GGAAGGGCGC TGGGAAACAC TGCCCTTTCA GCGGGCCATC
ATGAATGCGA TGGGCAGTGA CTACATCCGC GAGGTGAATG TGGTGAAGTC TGCCCGTGTT
GGTTATTCCA AAATGCTGCT GGGTGTTTAT GCCTACTTCA TAGAGCATAA GCAGCGCAAC
ACCCTTATCT GGTTGCCGAC GGATGGTGAT GCCGAGAACT TTATGAAAAC CCACGTTGAG
CCGACTATTC GTGATATTCC GTCGCTGCTG GCGCTGGCCC CGTGGTATGG CAAAAAGCAC
CGGGATAACA CGCTCACCAT GAAGCGTTTC ACCAATGGGC GTGGCTTCTG GTGCCTGGGC
GGTAAAGCGG CAAAAAACTA CCGTGAAAAG TCAGTGGATG TGGCGGGTTA TGATGAACTT
GCTGCCTTTG ATGAGGATAT TGAACAGGAA GGCTCTCCGA CGTTCCTGGG CGATAAGCGT
ATTGAAGGCT CGGTCTGGCC AAAGTCCATC CGTGGCTCCA CGCCCAAAGT GAGAGGCACC
TGCCAGATTG AGCGTGCAGC CAGTGAATCC CCGCATTTTA TGCGTTTTCA TGTTGCCTGC
CCGCACTGCG GGGAGGAGCA GTACCTTAAA TTTGGCGATA AAGAGACGCC GTTTGGCCTC
AAATGGACGC CGGATGATCC CTCCAGCGTG TTTTATCTCT GCGAGCATAA TGCCTGCGTC
ATCCGTCAGC AGGAGCTGGA CTTTACTGAT GCCCGTTATA TCTGCGAAAA GACCGGGATC
TGGACCCGTG ATGGCATTCT CTGGTTTTCG TCATCCGGTG AAGAGATTGA ACCGCCTGAC
AGTGTGACCT TTCACATCTG GACGGCGTAC AGCCCGTTCA CCACCTGGGT TCAGATTGTC
AAAGACTGGA TGAAGACGAA AGGGGATACG GGAAAACGTA AAACCTTCGT GAACACCACG
CTCGGTGAGA CATGGGAAGC GAAGATCGGC GAACGTCCGG ATGCTGAAGT GATGGCAGAG
CGGAAAGAGC ATTATTCAGC GTCCGTTCCT GACCGTGTGG CTTACCTGAC CGCCGGTATC
GACTCCCAGC TGGATCGCTA CGAAATGCGC GTATGGGGAT GGGGGCCGGG TGAGGAAAGC
TGGCTGATTG ATCGGCAGAT TATTATGGGC CGCCACGACG ATGAACAGAC GCTGCTGCGT
GTGGATGAGG CCATCAATAA AACCTATACC CGCCGGAATG GTGCAGAAAT GTCGGTATCC
CGTATCTGCT GGGATACTGG CGGGATTGAC CCGACTATTG TGTATGAACG CTCGAAAAAG
CATGGGCTGT TCCGGGTGAT CCCCATTAAA GGGGCATCCG TCTACGGAAA GCCGGTGGCC
AGCATGCCAC GTAAGCGAAA CAAAAACGGG GTTTACCTTA CCGAAATCGG TACGGATACC
GCGAAAGAGC AGATTTATAA CCGCTTCACA CTGACGCCGG AAGGGGATGA ACCGCTTCCC
GGTGCCGTTC ACTTCCCGAA TAACCCGGAT ATTTTTGATC TGACCGAAGC GCAGCAACTG
ACTGCTGAAG AGCAGGTCGA AAAATGGGTG GATGGCAGGA AAAAAATACT GTGGGACAGC
AAAAAGCGAC GCAATGAGGC GCTCGACTGC TTCGTTTATG CGCTGGCGGC GCTGCGCATC
AGTATTTCCC GCTGGCAGCT GGATCTCAGT GCACTGCTGG CGAGCCTGCA GGAAGAGGAT
GGTGCAGCAA CCAACAAGAA AACACTGGCA GAATACGCCC GTGCCTTATC CGGAGAGGAT
GAATGA
 
Protein sequence
MNISNSQVNR LRHFVRAGLR SLFRPEPQTA VEWADASYYL PKESAYQEGR WETLPFQRAI 
MNAMGSDYIR EVNVVKSARV GYSKMLLGVY AYFIEHKQRN TLIWLPTDGD AENFMKTHVE
PTIRDIPSLL ALAPWYGKKH RDNTLTMKRF TNGRGFWCLG GKAAKNYREK SVDVAGYDEL
AAFDEDIEQE GSPTFLGDKR IEGSVWPKSI RGSTPKVRGT CQIERAASES PHFMRFHVAC
PHCGEEQYLK FGDKETPFGL KWTPDDPSSV FYLCEHNACV IRQQELDFTD ARYICEKTGI
WTRDGILWFS SSGEEIEPPD SVTFHIWTAY SPFTTWVQIV KDWMKTKGDT GKRKTFVNTT
LGETWEAKIG ERPDAEVMAE RKEHYSASVP DRVAYLTAGI DSQLDRYEMR VWGWGPGEES
WLIDRQIIMG RHDDEQTLLR VDEAINKTYT RRNGAEMSVS RICWDTGGID PTIVYERSKK
HGLFRVIPIK GASVYGKPVA SMPRKRNKNG VYLTEIGTDT AKEQIYNRFT LTPEGDEPLP
GAVHFPNNPD IFDLTEAQQL TAEEQVEKWV DGRKKILWDS KKRRNEALDC FVYALAALRI
SISRWQLDLS ALLASLQEED GAATNKKTLA EYARALSGED E