| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1603 |
|---|
| Symbol | emrE |
|---|
| ID | 6967561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 1558248 |
|---|
| End bp | 1558580 |
|---|
| Gene Length | 333 bp |
|---|
| Protein Length | 110 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643385565 |
|---|
| Product | multidrug efflux protein |
|---|
| Protein accession | YP_002270059 |
|---|
| Protein GI | 209397090 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2076] Membrane transporters of cations and cationic drugs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.0000352426 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCTT ATATTTATCT TGGTGGTGCA ATACTTGCAG AGGTCATTGG TACAACCTTA
ATGAAGTTTT CAGAAGGTTT TACACGGTTA TGGCCATCTG TTGGTACAAT TATTTGTTAT
TGTGCATCAT TCTGGTTATT AGCTCAGACG CTGGCTTATA TTCCTACAGG GATTGCTTAT
GCTATCTGGT CAGGAGTCGG TATTGTCCTG ATTAGCTTAC TATCATGGGG GTTTTTCGGC
CAACGGCTGG ACCTGCCAGC CGTTATAGGC ATGATGTTGA TTTGTGCCGG TGTGTTGGTT
ATTAATTTAT TGTCACGAAG CACACCACAT TAA
|
|---|
| Protein sequence | MNPYIYLGGA ILAEVIGTTL MKFSEGFTRL WPSVGTIICY CASFWLLAQT LAYIPTGIAY
AIWSGVGIVL ISLLSWGFFG QRLDLPAVIG MMLICAGVLV INLLSRSTPH
|
|---|
| |