| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1596 |
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| Symbol | rluE |
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| ID | 6970712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 1552698 |
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| End bp | 1553321 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643385558 |
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| Product | 23S rRNA pseudouridine synthase E |
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| Protein accession | YP_002270052 |
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| Protein GI | 209396285 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0000922076 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCAAAAAA CTTCTTTTAG AAATCACCAG GTTAAGCGAT TCAGCTCACA ACGTTCTACC
AGGCGTAAAC CTGAAAACCA GCCCACGCGT GTGATCCTGT TCAATAAACC CTACGATGTT
CTTCCGCAGT TCACCGATGA AGCCGGACGC AAAACATTAA AAGAATTCAT CCCGGTTCAG
GGCGTTTATG CAGCAGGTCG TCTTGACCGC GATAGCGAAG GGTTACTGGT GCTGACCAAT
AACGGCGCGT TGCAGGCGCG TTTAACCCAG CCGGGCAAAC GCACCGGAAA AATCTATTAT
GTGCAGGTGG AAGGTATTCC CACACAAGAC GCACTTGAAG CCTTGCGCAA TGGCGTAACC
TTAAATGATG GCCCTACCCT GCCCGCAGGC GCGGAGCTGG TTGACGAACC CGCGTGGTTA
TGGCCGCGGA ATCCACCAAT TCGTGAACGC AAAAGTATTC CCACCAGCTG GCTGAAGATC
ACCTTATATG AAGGACGTAA TCGCCAGGTG CGCCGCATGA CCGCCCATGT TGGTTTCCCC
ACGCTGCGAC TGATTCGCTA TGCGATGGGT GATTACTCTT TGGATAACCT TGCCAATGGC
GAATGGCGAG AAGCAACAGA ATAA
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| Protein sequence | MQKTSFRNHQ VKRFSSQRST RRKPENQPTR VILFNKPYDV LPQFTDEAGR KTLKEFIPVQ
GVYAAGRLDR DSEGLLVLTN NGALQARLTQ PGKRTGKIYY VQVEGIPTQD ALEALRNGVT
LNDGPTLPAG AELVDEPAWL WPRNPPIRER KSIPTSWLKI TLYEGRNRQV RRMTAHVGFP
TLRLIRYAMG DYSLDNLANG EWREATE
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