Gene ECH74115_1592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1592 
SymbolpurB 
ID6966662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1549016 
End bp1550386 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content53% 
IMG OID643385554 
Productadenylosuccinate lyase 
Protein accessionYP_002270048 
Protein GI209399204 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0015] Adenylosuccinate lyase 
TIGRFAM ID[TIGR00928] adenylosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0000440379 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAATTAT CCTCACTGAC CGCCGTTTCC CCTGTCGATG GACGCTACGG CGATAAAGTC 
AGCGCGCTGC GCGGGATTTT CAGCGAATAT GGTTTGCTGA AATTCCGTGT ACAAGTTGAA
GTACGTTGGC TGCAAAAACT GGCCGCGCAC GCAGCGATCA AGGAAGTTCC TGCTTTTGCT
GCCGACGCAA TCGGTTACCT TGATGCAATT GTCGCCAATT TCAGCGAAGA AGATGCCGCA
CGCATCAAAA CCATCGAGCG TACTACTAAC CACGACGTTA AAGCGGTTGA GTATTTCCTG
AAAGAAAAAG TGGCGGAGAT CCCGGAACTG CACGCGGTTT CTGAATTCAT CCACTTTGCC
TGTACTTCGG AAGATATCAA TAACCTCTCC CACGCATTAA TGCTGAAAAC CGCGCGTGAT
GAAGTGATCC TGCCGTACTG GCGTCAACTA ATTGATGGCA TTAAAGATCT CGCCGTTCAG
TATCGCGATA TCCCGCTGCT GTCCCGTACC CACGGTCAGC CAGCCACGCC GTCAACCATC
GGTAAAGAGA TGGCAAACGT CGCCTACCGT ATGGAGCGCC AGTACCGCCA GCTTAACCAG
GTGGAGATCC TCGGCAAAAT CAACGGCGCG GTCGGTAACT ATAACGCCCA CATCGCCGCT
TACCCGGAAG TTGACTGGCA TCAGTTCAGC GAAGAGTTCG TCACCTCGCT GGGTATTCAA
TGGAACCCGT ACACTACCCA GATTGAACCG CACGACTACA TTGCCGAACT GTTTGATTGC
GTTGCGCGCT TCAACACCAT TCTGATCGAC TTTGACCGTG ACGTCTGGGG TTATATCGCC
CTTAACCACT TCAAACAGAA AACCATTGCT GGTGAGATTG GTTCTTCCAC CATGCCGCAT
AAAGTTAACC CGATCGACTT CGAAAACTCC GAAGGGAATC TGGGCCTTTC CAACGCGGTA
TTGCAGCATC TGGCAAGCAA ACTGCCGGTT TCCCGCTGGC AGCGTGACCT GACCGACTCC
ACCGTGCTGC GTAACCTCGG CGTGGGTATC GGTTATGCGC TGATTGCGTA TCAATCCACC
CTGAAAGGCG TGAGCAAACT GGAAGTGAAC CGTGACCATC TGCTGGATGA GCTGGATCAC
AACTGGGAAG TGCTGGCAGA ACCAATCCAG ACAGTTATGC GTCGCTATGG CATCGAAAAA
CCGTACGAGA AGCTGAAAGA GCTGACTCGC GGTAAGCGCG TTGACGCCGA AGGCATGAAG
CAGTTTATCG ACGGTCTGGC GTTGCCAGAA GAAGAGAAAG CCCGCCTGAA AGCGATGACG
CCGGCTAACT ACATTGGTCG CGCCATCACC ATGGTTGATG AGCTGAAATA A
 
Protein sequence
MELSSLTAVS PVDGRYGDKV SALRGIFSEY GLLKFRVQVE VRWLQKLAAH AAIKEVPAFA 
ADAIGYLDAI VANFSEEDAA RIKTIERTTN HDVKAVEYFL KEKVAEIPEL HAVSEFIHFA
CTSEDINNLS HALMLKTARD EVILPYWRQL IDGIKDLAVQ YRDIPLLSRT HGQPATPSTI
GKEMANVAYR MERQYRQLNQ VEILGKINGA VGNYNAHIAA YPEVDWHQFS EEFVTSLGIQ
WNPYTTQIEP HDYIAELFDC VARFNTILID FDRDVWGYIA LNHFKQKTIA GEIGSSTMPH
KVNPIDFENS EGNLGLSNAV LQHLASKLPV SRWQRDLTDS TVLRNLGVGI GYALIAYQST
LKGVSKLEVN RDHLLDELDH NWEVLAEPIQ TVMRRYGIEK PYEKLKELTR GKRVDAEGMK
QFIDGLALPE EEKARLKAMT PANYIGRAIT MVDELK