| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1591 |
|---|
| Symbol | phoP |
|---|
| ID | 6968523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 1548176 |
|---|
| End bp | 1548847 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643385553 |
|---|
| Product | DNA-binding transcriptional regulator PhoP |
|---|
| Protein accession | YP_002270047 |
|---|
| Protein GI | 209395806 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.0000245208 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTAC TGGTTGTTGA AGACAATGCG TTGTTACGTC ACCACCTTAA AGTTCAGATT
CAGGATGCTG GTCATCAGGT CGATGATGCA GAAGATGCCA AAGAAGCCGA TTATTATCTC
AATGAACATT TACCGGATAT TGCGATTGTC GATCTCGGAT TGCCAGACGA GGACGGTCTG
TCACTGATTT GCCGCTGGCG TAGCAATGAT GTTTCACTGC CGATTCTGGT ATTAACCGCC
CGTGAAAGCT GGCAGGACAA AGTCGAAGTA TTAAGTGCCG GTGCTGATGA TTACGTGACT
AAACCGTTTC ATATTGAAGA GGTGATGGCG CGAATGCAGG CATTAATGCG GCGTAATAGC
GGCCTGGCTT CACAGGTCAT TTCGCTCCCC CCGTTTCAGG TTGATCTCTC TCGCCGTGAA
TTATCTATTA ATGACGAAGT GATCAAACTG ACCGCGTTCG AATACACCAT TATGGAAACG
TTGATACGCA ATAATGGCAA AGTGGTCAGC AAAGATTCGT TAATGCTACA ACTCTATCCG
GATGCGGAGC TGCGGGAAAG CCATACCATT GATGTACTGA TGGGACGTCT GCGCAAAAAA
ATTCAGGCAC AATATCCGCA AGAAGTGATT ACTACCGTTC GCGGCCAGGG CTATTTGTTC
GAATTGCGCT GA
|
|---|
| Protein sequence | MRVLVVEDNA LLRHHLKVQI QDAGHQVDDA EDAKEADYYL NEHLPDIAIV DLGLPDEDGL
SLICRWRSND VSLPILVLTA RESWQDKVEV LSAGADDYVT KPFHIEEVMA RMQALMRRNS
GLASQVISLP PFQVDLSRRE LSINDEVIKL TAFEYTIMET LIRNNGKVVS KDSLMLQLYP
DAELRESHTI DVLMGRLRKK IQAQYPQEVI TTVRGQGYLF ELR
|
|---|
| |