Gene ECH74115_1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1561 
Symbol 
ID6966577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1526974 
End bp1527879 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content55% 
IMG OID643385528 
Productinsertion element IS2 transposase InsD 
Protein accessionYP_002270022 
Protein GI209397975 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.00000135849 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGATAGCG CACGCGCCCT TATTGCCCGG GGATGGGGAG TAAGCTTAGT CAGCCGTTGT 
CTCCGGGTGT CGCGTGCGCA GTTGTACGTC ATTCTCAGAC GAACCGATGA CTGGATGGAT
GGCCGCCGCA GTCGTCACAC TGATGATACG GATGTGCTTC TCCGTATACA CCATGTTATC
GGAGAGCTGC CCACGTATGG TTATCGTCGG GTATGGGCGC TGCTTCGCAG ACAGGCAGAA
CTTGATGGTA TGCCTGCGAT CAATGCCAAA CGTGTTTACC GGATCATGCG CCAGAATGCG
CTGTTGCTTG AGCGAAAACC TACTGTACCG CCATCGAAAC GGGCACATAC AGGCAGAGTG
GCCGTGAAAG AAAGCAATCA GCGATGGTGC TCTGACGGGT TCGAGTTCTG CTGTGATAAC
GGAGAGAGAC TGCGTGTCAC GTTCGCGCTG GACTGCTGTG ATCGTGAGGC ACTGCACTGG
GCGGTGACTA CCGGCGGCTT CAACAGTGAA ACAGTACAGG ACGTCATGCT GGGAGCGGTG
GAACGCCGCT TCGGCAACGA TCTTCCGTCG TCTCCAGTGG AGTGGCTGAC GGATAATGGT
TCATGCTACC GGGCTAATGA AACACGCCAG TTCGCCCGGA TGTTGGGACT TGAACCGAAG
AACACGGCGG TGCGGAGTCC GGAGAGTAAC GGAATAGCAG AGAACTTCGT GAAAACGATA
AAGCGTGACT ACATCAGTAT CATGCCCAAA CCAGACGGGT TAACGGCAGC AAAGAACCTT
GCAGAGGCGT TCGAGCATTA TAACGAATGG CATCCGCATA GTGCGCTGGG TTATCGCTCG
CCACGGGAAT ATCTGCGGCA GCGGGCTTGT AATGGGTTAA GTGATAACAG ATGTCTGGAA
ATATAG
 
Protein sequence
MDSARALIAR GWGVSLVSRC LRVSRAQLYV ILRRTDDWMD GRRSRHTDDT DVLLRIHHVI 
GELPTYGYRR VWALLRRQAE LDGMPAINAK RVYRIMRQNA LLLERKPTVP PSKRAHTGRV
AVKESNQRWC SDGFEFCCDN GERLRVTFAL DCCDREALHW AVTTGGFNSE TVQDVMLGAV
ERRFGNDLPS SPVEWLTDNG SCYRANETRQ FARMLGLEPK NTAVRSPESN GIAENFVKTI
KRDYISIMPK PDGLTAAKNL AEAFEHYNEW HPHSALGYRS PREYLRQRAC NGLSDNRCLE
I