Gene ECH74115_1550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1550 
Symbol 
ID6972189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1516285 
End bp1516626 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content58% 
IMG OID643385518 
Productphage minor tail protein 
Protein accessionYP_002270012 
Protein GI209397703 
COG category[S] Function unknown 
COG ID[COG4718] Phage-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0913332 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.00355714 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCTGAGA TAAAAACGCT GCATCTGGTC CCGCGTGAAG GGATGCAGGT GAGTGAGAAG 
CCGTCGGTGG TGAGGGTGCG GTTTGGTGAC GGTTATGAAC AGCGCCGCCC CACAGGGCTG
AATCCTCAAC TGAAGACGTT TCAGGCGGTG TTCCGGGTGA CGGATGAGTC AACCCGGCGC
TGGCTGGATG AATTTTTATC CTGGCATGGT GGTTACCGTG CCTTTTTGTG GCGACCGCCG
AAACATAACC GGACGGTGAG GGGTGTGTGC CGGGAGTGGA GCGTCACGGA TAACGCCCGG
TACAGTGATT TCAGCTGTAC GATTGAGCAG GTGGTGAACT GA
 
Protein sequence
MAEIKTLHLV PREGMQVSEK PSVVRVRFGD GYEQRRPTGL NPQLKTFQAV FRVTDESTRR 
WLDEFLSWHG GYRAFLWRPP KHNRTVRGVC REWSVTDNAR YSDFSCTIEQ VVN