Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_1500 |
Symbol | npdA |
ID | 6968115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 1482236 |
End bp | 1483057 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643385471 |
Product | NAD-dependent deacetylase |
Protein accession | YP_002269965 |
Protein GI | 209397898 |
COG category | [K] Transcription |
COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000250063 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTCGC GTCGGGGTCA TCGGTTAAGT CGTTTTCGTA AAAATAAACG CCGCCTGCGC GAGCGTTTGC GTCAGCGTAT TTTTTTCAGA GATAAAGTGG TGCCGGAAGC AATGGAAAAA CCAAGAGTAC TCGTACTGAC AGGGGCAGGA ATTTCTGCGG AATCAGGTAT TCGTACCTTT CGCGCCGCAG ATGGCCTGTG GGAAGAACAT CGGGTTGAAG ATGTGGCAAC GCCGGAAGGT TTCGATCGCG ATCCTGAACT GGTGCAAGCG TTTTATAACG CCCGTCGTCG ACAGCTGCAG CAGCCAGAAA TTCAGCCTAA CGCCGCGCAT CTTGCGCTGG CTAAACTGCA AGATGCTCTC GGCGATCGCT TTTTGCTGGT GACGCAGAAT ATAGACAACC TGCATGAACG CGCAGGTAAT ACCAATGTGA TTCATATGCA TGGGGAACTG CTGAAAGTTC GTTGTTCACA AAGTGGTCAG GTTCTCGACT GGACCGGAGA CGTTACCCCA GAAGATAAAT GCCATTGCTG CCAGTTCCCG GCCCCCTTGC GCCCACACGT AGTATGGTTT GGCGAAATGC CACTCGGCAT GGATGAAATT TATATGGCGT TGTCGATGGC CGATATTTTC ATTGCCATTG GTACTTCCGG GCATGTTTAT CCGGCGGCTG GGTTTGTTCA CGAAGCGAAA CTGCATGGCG CGCACACCGT GGAGCTGAAT CTTGAACCAA GTCAGGTCGG TAATGAATTT GCCGAGAAAT ATTACGGCCC GGCAAGCCAG GTGGTGCCAG AATTTGTTGA AAAGTTGCTG AAGGGATTAT AA
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Protein sequence | MLSRRGHRLS RFRKNKRRLR ERLRQRIFFR DKVVPEAMEK PRVLVLTGAG ISAESGIRTF RAADGLWEEH RVEDVATPEG FDRDPELVQA FYNARRRQLQ QPEIQPNAAH LALAKLQDAL GDRFLLVTQN IDNLHERAGN TNVIHMHGEL LKVRCSQSGQ VLDWTGDVTP EDKCHCCQFP APLRPHVVWF GEMPLGMDEI YMALSMADIF IAIGTSGHVY PAAGFVHEAK LHGAHTVELN LEPSQVGNEF AEKYYGPASQ VVPEFVEKLL KGL
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