Gene ECH74115_1479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1479 
Symbol 
ID6969357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1459457 
End bp1460254 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content51% 
IMG OID643385450 
Productputative metallodependent hydrolase 
Protein accessionYP_002269944 
Protein GI209398769 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000171284 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0000000124971 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTTTAG TCGACTCACA CTGCCATCTC GATGGTCTGG ATTATGAATC TTTGCATAAG 
GACGTGGATG ACGTTCTGGC GAAAGCCGCC GCACGCGATG TGAAATTTTG TCTGGCAGTC
GCCACAACAT TACCGGGTTA TTTACACATG CGGGATCTGG TAGGCGAACG TGACAACGTC
GTATTTTCTT GTGGCGTGCA TCCACTCAAC CAGAATGATC CCTACGATGT AGAAGATTTA
CGCCGTCTGG CGGCAGAAGA GGGTGTTGTA GCGCTGGGTG AAACCGGGCT GGATTATTAT
TACACACCGG AAACTAAAGT ACGTCAGCAA GAGTCCTTCA TCCATCATAT CCAGATTGGT
CGTGAACTGA ACAAGCCGGT TATCGTCCAT ACCCGTGACG CCCGCGCCGA TACGCTGGCA
ATTCTGCGCG AAGAAAAAGT GACGGATTGC GGTGGCGTAC TACACTGTTT TACAGAGGAC
AGAGAAACGG CGGGCAAATT ACTGGATCTC GGATTTTACA TCTCCTTTTC CGGCATTGTG
ACCTTCCGTA ATGCGGAGCA ACTGCGCGAT GCTGCGCGTT ATGTCCCCCT GGATCGGTTA
CTGGTGGAAA CTGACTCACC TTACCTTGCG CCGGTGCCGC ATCGAGGAAA AGAGAATCAA
CCTGCGATGG TTCGTGACGT TGCAGAATAC ATGGCTGTGT TGAAAGGTGT TGCCGTTGAA
GAACTGGCGC AGGTAACCAC CGATAACTTC GCCCGTCTGT TTCACATCGA CGCTTCCCGC
CTTCAATCCA TCCGTTGA
 
Protein sequence
MFLVDSHCHL DGLDYESLHK DVDDVLAKAA ARDVKFCLAV ATTLPGYLHM RDLVGERDNV 
VFSCGVHPLN QNDPYDVEDL RRLAAEEGVV ALGETGLDYY YTPETKVRQQ ESFIHHIQIG
RELNKPVIVH TRDARADTLA ILREEKVTDC GGVLHCFTED RETAGKLLDL GFYISFSGIV
TFRNAEQLRD AARYVPLDRL LVETDSPYLA PVPHRGKENQ PAMVRDVAEY MAVLKGVAVE
ELAQVTTDNF ARLFHIDASR LQSIR