Gene ECH74115_1454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1454 
SymbolflgD 
ID6972186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1434584 
End bp1435279 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content55% 
IMG OID643385427 
Productflagellar basal body rod modification protein 
Protein accessionYP_002269921 
Protein GI209396598 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.00192771 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCATTG CGGTAACCAC CACCGATCCG ACAAATACCG GCGTCAGTAC CACCAGCAGT 
AGTTCGCTCA CGGGCAGCAA CGCCGCAGAT TTACAAAGCA GTTTTCTGAC TTTGTTGGTG
GCGCAGCTGA AAAACCAGGA CCCGACCAAT CCAATGGAAA ACAACGAGCT GACGTCGCAA
TTGGCACAAA TCAGCACGGT CAGCGGGATT GAAAAACTCA ATACCACGCT CGGATCTATT
TCCGGACAGA TTGATAACAG CCAGTCGTTA CAGGCCAGTA ACCTGATCGG TCACGGCGTG
ATGATCCCCG GCACCACTGT TCTTGCGGGA ACCGGCAGTG AAGAAGGGGC TGTGACCACG
ACCACGCCGT TTGGTGTTGA GCTGCAACAG GCGGCAGACA AAGTTACGGC CACCATCACC
GATAAAAATG GCGCGGTTGT GCGCACCATT GATATTGGTG AACTGACCGC CGGAGTTCAC
AGTTTCACCT GGGACGGTAC GTTGACTGAC GGCAGCACTG CGCCGAACGG TTCTTACAAC
GTAGCGATTA GCGCCAGTAA CGGTGGTACA CAACTGGTTG CCCAGCCGCT GCAGTTTGCT
CTGGTGCAGG GTGTGATCCG CGGCAACAAC GGTAATACGC TGGATCTCGG CACTTACGGC
ACCACCACCC TCGACGAAGT ACGGCAGATA ATTTAA
 
Protein sequence
MSIAVTTTDP TNTGVSTTSS SSLTGSNAAD LQSSFLTLLV AQLKNQDPTN PMENNELTSQ 
LAQISTVSGI EKLNTTLGSI SGQIDNSQSL QASNLIGHGV MIPGTTVLAG TGSEEGAVTT
TTPFGVELQQ AADKVTATIT DKNGAVVRTI DIGELTAGVH SFTWDGTLTD GSTAPNGSYN
VAISASNGGT QLVAQPLQFA LVQGVIRGNN GNTLDLGTYG TTTLDEVRQI I