| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1395 |
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| Symbol | |
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| ID | 6967004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 1387736 |
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| End bp | 1390585 |
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| Gene Length | 2850 bp |
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| Protein Length | 949 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643385369 |
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| Product | pertactin family protein |
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| Protein accession | YP_002269864 |
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| Protein GI | 209399047 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.830364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.238303 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAC ATCTGAACAC CAGCTACAGG CTGGTATGGA ATCACATTAC GGGCACCCTG
GTGGTGGCCT CCGAACTGGC CCGCTCACGG GGAAAACGCG CCGGTGTGGC GGTTGCGCTG
TCTCTTGCTG CTGTCACATC AGTCCCGGCA CTGGCTGCTG ACAAGGTTGT ACAGGCGGGA
GAAACCGTGA ACGATGGAAC ACTGACAAAT CATGACAACC AGATTGTCTT CGGTACGGCC
AACGGAATGA CCATCAGTAC CGGGCTGGAA CTGGGGCCGG ACAGTGAAGA AAACACCGGT
GGGCAATGGA TACAGAATGG CGGGATAGCC GGAAACACCA CTGTCACCAC AAATGGTCGT
CAGGTCGTGC TGGAGGGGGG AACAGCCAGT GATACGGTTA TTCGTGACGG CGGGGGACAG
AGCCTGAACG GACTGGCGGT GAACACCACA CTGAATAACA GAGGCGAGCA GTGGGTGCAT
GAGGGCGGGG TTGCCACCGG TACAATTATC AACCGCGACG GTTACCAGAG CGTTAAAAGT
GGCGGGCTGG CAACAGGAAC CATCATCAAC ACCGGCGCAG AAGGCGGCCC TGATTCTGAC
AACTCGTATA CGGGTCAGAA GGTCCAGGGA ACAGCAGAAT CCACCACCAT CAACAAAAAT
GGACGGCAGA TTATCTTATT TTCCGGGCTA GCCCGTGACA CTCTCATTTA CGCAGGTGGT
GACCAGTCGG TACACGGAAG GGCCCTGAAT ACCACACTGA ATGGCGGTTA CCAATATGTG
CACAGGGACG GACTTGCGCT GAACACGGTA ATTAACGAGG GGGGCTGGCA GGTTGTTAAG
GCAGGTGGCG CTGCCGGTAA CACCACCATA AATCAGAACG GTGAACTGAG GGTACATGCC
GGCGGGGAAG CCACTGCAGT CACCCAGAAC ACGGGCGGTG CACTGGTTAC CAGTACTGCT
GCAACTGTCA TCGGCACAAA CCGTCTGGGG AATTTCACGG TGGAAAACGG TAAGGCTGAC
GGTGTTGTTC TGGAATCCGG CGGTCGTCTG GATGTACTGG AGAGCCATTC AGCACAGAAT
ACCCTAGTGG ATGACGGCGG TACCCTGGCA GTGTCTGCCG GCGGTAAGGC GACAAGTGTC
ACCATAACAT CCGGTGGTGC CCTGATTGCA GACAGTGGTG CCACTGTTGA GGGGACCAAT
GCCAGCGGTA AGTTCAGTAT TGATGGCACA TCCGGTCAGG CCAGCGGCCT GCTGCTGGAA
AATGGCGGCA GCTTTACGGT TAATGCCGGG GGACAGGCTG GCAACACCAC TGTCGGACAT
CGTGGAACAC TGACGCTGGC TGCCGGGGGA AGTCTGAGTG GCAGAACACA GCTCAGTAAA
GGCGCCAGTA TGGTACTGAA TGGTGATGTG GTCAGTACCG GCGATATTGT TAACGCAGGG
GAGATTCGCT TTGATAATCA GACGACACCG AATGCCGCGC TGAGCCGTGC TGTTGCAAAA
AGTAACTCCC CGGTAACGTT CCATAAACTG ACCACCACGA ACCTCACCGG CCAGGGCGGC
ACCATCAATA TGCGTGTTCG CCTTGATGGC AGCAATGCCT CTGACCAGCT GGTGATTAAT
GGTGGTCAGG CAACCGGCAA AACCTGGCTT GCGTTTACAA ATGTCGGAAA CAGCAACCTC
GGGGTGGCAA CCACCGGACA GGGTATCCGG GTTGTGGATG CACAGAATGG CGCCACCACA
GAAGAAGGTG CGTTTGCCCT GAGTCGCCCG CTTCAGGCCG GCGCCTTTAA CTACACCCTG
AACCGTGACA GCGATGAAGA CTGGTACCTG CGCAGTGAAA ATGCTTATCG TGCTGAAGTC
CCCCTGTATA CATCCATGTT GACACAGGCA ATGGACTATG ACCGGATTCT GGCAGGCTCC
CGCAGCCATC AGACCGGTGT AAACGGTGAA AATAACAGCG TCCGTCTCAG CATTCAGGGC
GGTCATCTCG GTCACGATAA CAACGGCGGT ATTGCCCGTG GAGCCACGCC GGAAAGCAGC
GGCAGCTATG GCTTCGTCCG TCTGGAGGGT GACCTGCTCA GAACAGAGGT TGCCGGTATG
TCTCTGACGA CAGGGGTGTA TGGTGCTGCA GGCCATTCTT CCGTTGATGT TAAGGATGAT
GACGGTTCCC GCGCCGGCAC GGTCCGGGAT GATGCCGGCA GTCTGGGCGG ATACCTGAAT
CTGGTACACA CATCCTCCGG CCTGTGGGCT GACATTGTGG CCCAGGGAAC CCGTCACAGC
ATGAAAGCGT CATCGGACAA TAACGACTTC CGCGCCCGGG GCTGGGGCTG GCTGGGCTCA
CTGGAAACCG GTCTGCCCTT CAGTATCACT GACAATCTGA TGCTGGAGCC ACAACTGCAG
TACACCTGGC AGGGACTCTC CCTGGATGAC GGCCAGGATA ACGCCGGTTA TGTGAAGTTC
GGGCATGGCA GTGCACAACA TGTGCGTGCC GGTTTCCGTC TGGGCAGCCA CAACGATATG
ACCTTTGGTG AAGGCACCTC ATCCCGTGAC ACCCTGCGCG ACAGTGCAAA ACACAGTGTG
AGTGAACTGC CGGTGAACTG GTGGGTACAG CCTTCTGTTA TCCGCACCTT CAGCTCCCGG
GGTGACATGA GCATGGGGAC AGCCGCAGCC GGCAGTAACA TGACGTTCTC ACCGTCCCGG
AATGGCACGT CACTGGACCT GCAGGCCGGA CTGGAAGCCC GTATCCGGGA AAATATCACC
CTGGGCGTTC AGGCCGGTTA TGCCCACAGC GTCAGCGGCA GCAGCGCTGA AGGCTATAAC
GGTCAGGCTA CGCTGAATAT GACTTTCTGA
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| Protein sequence | MKRHLNTSYR LVWNHITGTL VVASELARSR GKRAGVAVAL SLAAVTSVPA LAADKVVQAG
ETVNDGTLTN HDNQIVFGTA NGMTISTGLE LGPDSEENTG GQWIQNGGIA GNTTVTTNGR
QVVLEGGTAS DTVIRDGGGQ SLNGLAVNTT LNNRGEQWVH EGGVATGTII NRDGYQSVKS
GGLATGTIIN TGAEGGPDSD NSYTGQKVQG TAESTTINKN GRQIILFSGL ARDTLIYAGG
DQSVHGRALN TTLNGGYQYV HRDGLALNTV INEGGWQVVK AGGAAGNTTI NQNGELRVHA
GGEATAVTQN TGGALVTSTA ATVIGTNRLG NFTVENGKAD GVVLESGGRL DVLESHSAQN
TLVDDGGTLA VSAGGKATSV TITSGGALIA DSGATVEGTN ASGKFSIDGT SGQASGLLLE
NGGSFTVNAG GQAGNTTVGH RGTLTLAAGG SLSGRTQLSK GASMVLNGDV VSTGDIVNAG
EIRFDNQTTP NAALSRAVAK SNSPVTFHKL TTTNLTGQGG TINMRVRLDG SNASDQLVIN
GGQATGKTWL AFTNVGNSNL GVATTGQGIR VVDAQNGATT EEGAFALSRP LQAGAFNYTL
NRDSDEDWYL RSENAYRAEV PLYTSMLTQA MDYDRILAGS RSHQTGVNGE NNSVRLSIQG
GHLGHDNNGG IARGATPESS GSYGFVRLEG DLLRTEVAGM SLTTGVYGAA GHSSVDVKDD
DGSRAGTVRD DAGSLGGYLN LVHTSSGLWA DIVAQGTRHS MKASSDNNDF RARGWGWLGS
LETGLPFSIT DNLMLEPQLQ YTWQGLSLDD GQDNAGYVKF GHGSAQHVRA GFRLGSHNDM
TFGEGTSSRD TLRDSAKHSV SELPVNWWVQ PSVIRTFSSR GDMSMGTAAA GSNMTFSPSR
NGTSLDLQAG LEARIRENIT LGVQAGYAHS VSGSSAEGYN GQATLNMTF
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