Gene ECH74115_1379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1379 
Symbol 
ID6967872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1375525 
End bp1376412 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content54% 
IMG OID643385357 
ProductIS629, transposase orfB 
Protein accessionYP_002269852 
Protein GI209397293 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.822294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.0945096 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTGC TGGATAAGCT GCGTGAGCAG TACGGGGTCG GACCGGTATG CAGTGAACTG 
CATATTGCCC CGTCAACGTA TTACCACTGT CAGCAACAGC GACATCATCC TGATAAACGC
AGTGCCCGTG CTCAGCGCGA TGACTGGCTG AAGAGAGAGA TACAGCGCGT ATACGATGAA
AATCATCAGG TGTACGGTGT GCGTAAAGTC TGGCGCCAGT TGTTACGCGA AGGTATCAGG
GTGGCCAGAT GTACAGTGGC GCGCCTCATG GCGGTTATGG GACTTGCCGG TGTTCTCCGG
GGTAAAAAGG TCCGTACTAC CGTCAGCCGG AAAGCCGTTT CCGCAGGCGA CCGCGTAAAC
CGTCAGTTCG TGGCAGAACG TCCTGACCAG CTGTGGGTGG CTGATTTTAC TTACGTCAGC
ACATGGCAGG GCTTCGTCTA TGTGGCGTTC ATCATTGATG TGTTTGCCGG ATGTATCGTG
GGGTGGCGAG TCTCATCGTC TATGGAAACG ACATTCGTGC TGGATGCACT GGAGCAGGCG
TTGTGGGCCC GTCGGCCGTC CGGCACAGTC CATCACAGTG ATAAAGGTTC TCAGTATATA
TCACTGGCCT ATACGGAGCG ACTAAAAGAA GCAAAACTGC TGGCATCAAC AGGGAGTACA
GGTGACTCGT ATGACAACGC GATGGCGGAG AGCATCAATG GTCTTTACAA AGCGGAGGTA
ATACACCGTA AGAGCTGGAA AAACCGTGCA GAAGTGGAAC TGGCCACACT CACGTGGGTG
GACTGGTATA ACAATCGACG ATTGCTGGGA AGGCTGGGTC ATATCCCTCC GGCAGAAGCA
GAAAAAGCTT ATTATGCTTC CATCAGAAAC GATGATCTGG CAGCCTGA
 
Protein sequence
MPLLDKLREQ YGVGPVCSEL HIAPSTYYHC QQQRHHPDKR SARAQRDDWL KREIQRVYDE 
NHQVYGVRKV WRQLLREGIR VARCTVARLM AVMGLAGVLR GKKVRTTVSR KAVSAGDRVN
RQFVAERPDQ LWVADFTYVS TWQGFVYVAF IIDVFAGCIV GWRVSSSMET TFVLDALEQA
LWARRPSGTV HHSDKGSQYI SLAYTERLKE AKLLASTGST GDSYDNAMAE SINGLYKAEV
IHRKSWKNRA EVELATLTWV DWYNNRRLLG RLGHIPPAEA EKAYYASIRN DDLAA