| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1318 |
|---|
| Symbol | |
|---|
| ID | 6969999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 1331574 |
|---|
| End bp | 1333193 |
|---|
| Gene Length | 1620 bp |
|---|
| Protein Length | 539 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 643385303 |
|---|
| Product | integral membrane protein |
|---|
| Protein accession | YP_002269798 |
|---|
| Protein GI | 209397281 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAAA AAATCAGTAT TAATTTTCTT TTCTTGATGT TAATGATAGA TGTTGTTTTT
GCCACATTGT TCAATATCCC TGTCTGGATG CATCTGTTTA ATATTATTAA TAACCTTGAT
GGTGTGAAAC TTGGATTTAT TATATCTCTT CCAGTCTTTC TGATATCTGC ATTAAATTTT
GTTTTTACAC CGTTCTCATT CAGGTATATA TTTAAACCTT TTTTTTGTAT TCTGTTTATC
TGTAGTTCCA TTGTTACATA TGCCACCATG AAATATGGTG TGCAGTTTGA TAAAACAATG
ATGCAGAATA TTTTTGAAAC AAATGCAGGT GAAATGACAT CATATTTCAA TATGTCTGTT
GTACTGTGGT TTTTATTTAC GGGTATACTT CCATGTGGAC TATTGTTGTT AGTAAATATC
CGTTATCCTG AGACATGGAT AAAGGGTATT ACATATCGTT TAATATCAAT GTTTGCATCT
CTCTTGATTA TATTTGCGAT TGCGTTTTTC TTTTATAAGG ATTATGCATC AGTTGGCAGA
AACAACTCTT CATTAAATAA AGAAATAATA CCTACTAATT ATATCTACAG TGGGTTTAAA
TATGTAAGGG ATTTTTTTGT TTCTCCTGGC GAGTTTCGTC AGACTGGAAC GGATGCATCC
CGCACAATAA ATGAAAAACA AAAGCCGGTA ATTATGTTTT TAGTTGTCGG GGAGACAGCA
AGAAGTCAAA ACTATGCTCT GAATGGATAT TCTCGTGGTA CCAATGATTT TACAAAGAAA
TATAATGAAC TTATATCCTT TCATAATGTG CAGTCGTGTG GCACATCCAC AGCCATATCT
GTTCCATGCA TGTTTTCAGA TATGAAGCGA AAAGAGTTCA ATTCCCGCAA AGCGGTAAAT
TCGGAAAATG TACTGGATAT TCTGTACAGA ACGGGGGTAA ATTTACTCTG GATTGAAAAT
GACGGGGGAT GTAAAGGTGT ATGTAAGCGA ATCCCTACAA TTAATATTGA GCCATCAAAT
TCAGATAATA CATTATGCAA GAAAAACTCA TGTTATGATG AGGTTATGCT AAAAAATATT
GATGAGTATA TAAATAATAA CTCAGAGGAT AAACTTATCG TATTTCATTT GATGGGTAGT
CATGGTCCTA CCTACTATCT CCGTTATCCT GAGTCACATA AATATTTTAA ACCAACATGT
GATCGTAGTG ATATCGAAAA TTGTACGCAT GAGCAATTGA TTAATACCTA TGATAATACA
ATTCGCTATA CTGATTATAT AATATCAAAA TTAATTGACA AGCTTATCGA ATATAAAGAT
GAGTATGATA CTGTTTTATT ATATGTCTCT GACCATGGAG AATCTCTGGG AGAAAATGGA
TTATACTTAC ATGGAACACC ATATAATGTT GCTCCAGCTG AGCAAACGCA TGTGCCTCTT
ATTACCTGGA TGTCTCCGGG GTTCGTTTCC TCTAAAAAAA TTGATTTGAA TTGTTTGTCA
GAACATGCTC TAAACAGAAC AGTAAGTCAT GATAATATAT TTTCATCGTT ACTGGGGTTA
TGGAATGTAA ATACTTCAGT TTATAATAAA GAAGATGATA TTATATCCTC CTGCAGATAG
|
|---|
| Protein sequence | MIKKISINFL FLMLMIDVVF ATLFNIPVWM HLFNIINNLD GVKLGFIISL PVFLISALNF
VFTPFSFRYI FKPFFCILFI CSSIVTYATM KYGVQFDKTM MQNIFETNAG EMTSYFNMSV
VLWFLFTGIL PCGLLLLVNI RYPETWIKGI TYRLISMFAS LLIIFAIAFF FYKDYASVGR
NNSSLNKEII PTNYIYSGFK YVRDFFVSPG EFRQTGTDAS RTINEKQKPV IMFLVVGETA
RSQNYALNGY SRGTNDFTKK YNELISFHNV QSCGTSTAIS VPCMFSDMKR KEFNSRKAVN
SENVLDILYR TGVNLLWIEN DGGCKGVCKR IPTINIEPSN SDNTLCKKNS CYDEVMLKNI
DEYINNNSED KLIVFHLMGS HGPTYYLRYP ESHKYFKPTC DRSDIENCTH EQLINTYDNT
IRYTDYIISK LIDKLIEYKD EYDTVLLYVS DHGESLGENG LYLHGTPYNV APAEQTHVPL
ITWMSPGFVS SKKIDLNCLS EHALNRTVSH DNIFSSLLGL WNVNTSVYNK EDDIISSCR
|
|---|
| |