| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1267 |
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| Symbol | |
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| ID | 6968083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 1278033 |
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| End bp | 1279463 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643385257 |
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| Product | diguanylate cyclase (GGDEF) domain protein |
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| Protein accession | YP_002269752 |
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| Protein GI | 209400191 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.413897 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGACAACAG TACAGTTCTT ATATCTATTA ATAATAGAAA GGGATCTACA ACCTACAGAT
TGGTGTAGCT TTATGGAAAA AGACTATTTG AGAATTAGTA GTACTGTATT AGTGAGCTTA
TTGTTTGGGC TTGCTTTGGT TTTGGTGAAT AGTTGGTTTA ATCAGCCAGG CGTTGAGGAA
GTTGTTCCAC GATCAACCTA TCTGATGGTA ATGATTGCTT TATTTTTTAT CGATACTGTT
GCATTTATTT TTATGCAGTT GTATTTCATT TATGACCGTA GGCAATTTTC AAACTGTATA
CTTAGTTTGG CTTTTCTGAG TTGTTTGATT TACTTTGTTA AAACCGTCAT TATCATTCAG
CAAATTATTG AGGGGCGTTT GACAAGCAGT GTTGTCCAAA ATGACATTGC AATCTATTAT
TTGTTTCGTC AGATGAGTTT GTGCATATTA ATATTTCTGG CATTGGTGAA TAAAGTTAGT
GAAAACACAA AACAGCGCAA TTTATTTTCC AAAAAAATGA CTTTGTGCAT AAGTTTGTTT
TTTGTTTTTG GGGGGGCGAT AGTTGCTCAC ATACTTTCTA GTCATTATGA GAGCTACAAT
TTACACATTG CCGAGTTAAC CAATGAAAAT GGTCAGGTGG TTTGGAAAGC CTCATATGTT
ACCATAATGA TTTTCATGTG GTTAACCTTG CTTTCGGTTA ATCTATACTT TAATGGTTTA
CGCTATGATA TCTGGAATGG AGTGACGGTG ATTGCTTTTT GTGCCGTACT GTACAATATC
TCTCTGTTAT TTATGAGTAG GTATAGCGTG TCCACTTGGT ATATTAGTCG CACTATTGAA
GTAGTCAGTA AGTTAACCGT TATGGTAATA TTTATGTGCC ATATATTCAG TGCGCTACGA
GTAACAAAGA ACATTGCACA TCGCGATCCC TTAACCAATA TATTTAACAG AAATTATTTT
TTTAATGAAC TGACAGTTCA ATCAGCATCA GCCAAAAAAA CGCCTTATTG CGTCATGATT
ATGGATATCG ACCACTTCAA AAAAGTCAAC GACACCTGGG GGCATCCGGT TGGCGATCAG
GTGATAAAAA CAGTGGTGAA TATCATTGGG AAAAGCATAC GACCAGATGA CCTTTTAGCG
CGCGTCGGCG GCGAAGAGTT TGGCGTCTTG CTGACGGACA TCGATACTGA ACGTGCGAAA
GCTTTAGCGG AAAGGATTCG GGAAAATGTT GAGCGTTTAA CTGGCGATAA TCCTGAATAC
GCTATACCAC AAAAAGTGAC GATTAGTATT GGCGCTGTTG TGACTCAGGG AAATGCGTTA
AACCCGAATG AGATCTATCG ACTGGCTGAT AACGCACTAT ACGAGGCGAA AGAGACCGGG
CGTAATAAGG TGGTTGTGAG GGATGTGGTG AATTTTTGTG AGTCACCATA A
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| Protein sequence | MTTVQFLYLL IIERDLQPTD WCSFMEKDYL RISSTVLVSL LFGLALVLVN SWFNQPGVEE
VVPRSTYLMV MIALFFIDTV AFIFMQLYFI YDRRQFSNCI LSLAFLSCLI YFVKTVIIIQ
QIIEGRLTSS VVQNDIAIYY LFRQMSLCIL IFLALVNKVS ENTKQRNLFS KKMTLCISLF
FVFGGAIVAH ILSSHYESYN LHIAELTNEN GQVVWKASYV TIMIFMWLTL LSVNLYFNGL
RYDIWNGVTV IAFCAVLYNI SLLFMSRYSV STWYISRTIE VVSKLTVMVI FMCHIFSALR
VTKNIAHRDP LTNIFNRNYF FNELTVQSAS AKKTPYCVMI MDIDHFKKVN DTWGHPVGDQ
VIKTVVNIIG KSIRPDDLLA RVGGEEFGVL LTDIDTERAK ALAERIRENV ERLTGDNPEY
AIPQKVTISI GAVVTQGNAL NPNEIYRLAD NALYEAKETG RNKVVVRDVV NFCESP
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