| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1251 |
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| Symbol | putA |
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| ID | 6970285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 1258018 |
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| End bp | 1261980 |
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| Gene Length | 3963 bp |
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| Protein Length | 1320 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643385243 |
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| Product | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_002269738 |
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| Protein GI | 209398214 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
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| TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.63555 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAACCA CCACCATGGG GGTTAAGCTG GACGACGCGA CGCGTGAGCG TATTAAGTCT
GCCGCGACAC GTATCGATCG CACGCCACAC TGGTTAATTA AGCAGGCGAT TTTTTCTTAT
CTCGAACAAC TGGAAAACAG CGATACTCTG CCAGAGCTAC CTGCGCTGCT TTCTGGCGCT
GCCAATGAGA GCGATGAAGC ACCGACTCCG GCAGAGGAAC CACACCAGCC ATTCCTCGAC
TTTGCCGAGC AAATTTTGCC CCAGTCGGTT TCCCGCGCTG CGATCACCGC GGCCTATCGC
CGCCCGGAAA CCGAAGCGGT TTCTATGCTG CTGGAACAAG CCCGCCTGCC GCAACCAGTT
GCTGAACAGG CACACAAACT GGCGTATCAA CTGGCCGATA AACTGCGTAA TCAAAAAAAT
GCCAGTGGCC GCGCAGGTAT GGTCCAGGGG TTATTGCAGG AGTTTTCGCT GTCATCGCAG
GAAGGCGTGG CGCTGATGTG TCTGGCAGAA GCGTTGTTGC GTATTCCCGA CAAAGCCACC
CGTGATGCGT TAATTCGCGA CAAAATCAGC AACGGTAACT GGCAGTCACA CATTGGTCGT
AGCCCGTCAC TGTTTGTTAA TGCCGCTACC TGGGGGCTGT TGTTTACTGG CAAACTGGTT
TCCACCCATA ACGAAGCCAG CCTCTCCCGC TCGCTGAACC GCATTATCGG TAAGAGCGGT
GAACCGCTGA TCCGCAAAGG TGTGGATATG GCAATGCGCC TGATGGGCGA GCAGTTCGTC
ACGGGCGAAA CCATCGCGGA AGCGTTAGCC AATGCCCGCA AGCTGGAAGA GAAAGGTTTC
CGTTACTCTT ACGATATGCT CGGCGAAGCT GCACTGACTG CCGCAGACGC ACAGGCGTAC
ATGGTTTCCT ATCAGCAGGC GATTCACGCC ATTGGTAAAG CGTCTAACGG TCGTGGCATC
TATGAAGGTC CGGGCATTTC AATCAAGCTG TCGGCGCTGC ATCCGCGTTA CAGCCGCGCC
CAGTATGACC GGGTAATGGA AGAGCTTTAC CCGCGTCTGA AATCACTCAC CCTGCTGGCG
CGTCAGTACG ATATTGGTAT CAACATTGAC GCCGAAGAGG CCGATCGTCT GGAGATCTCC
CTCGATCTGC TGGAAAAACT CTGTTTCGAG CCAGAGCTGG CAGGCTGGAA CGGCATCGGT
TTTGTTATTC AGGCTTATCA AAAACGCTGC CCGCTGGTGA TTGATTACCT GATTGATCTC
GCCACCCGCA GCCGTCGCCG TCTTATGATT CGCCTGGTGA AAGGCGCGTA CTGGGATAGT
GAAATCAAGC GCGCGCAGAT GGACGGCCTT GAAGGTTATC CGGTTTATAC CCGCAAGGTA
TATACCGACG TTTCTTATCT CGCCTGTGCG AAAAAGCTGC TGGCGGTGCC GAATCTAATC
TACCCGCAGT TCGCAACGCA CAACGCCCAC ACGCTGGCGG CGATTTATCA ACTGGCAGGT
CAGAACTACT ATCCGGGTCA GTACGAGTTC CAGTGCCTGC ATGGTATGGG CGAGCCGCTG
TATGAGCAGG TCACCGGGAA AGTTGCCGAC GGCAAACTTA ACCGTCCGTG TCGTATTTAT
GCCCCGGTCG GCACACATGA AACGCTGCTG GCGTATCTGG TGCGCCGCCT GCTGGAAAAC
GGTGCTAACA CCTCGTTTGT TAACCGTATT GCCGATACCT CTTTGCCACT GGATGAACTG
GTCGCCGATC CGGTCACTGC TGTAGAAAAA CTGGCACAAC AGGAAGGGCA AACTGGATTA
CCGCATCCGA AAATTCCCCT GCCGCGCGAT CTTTACGGTC ACGGGCGCGA CAACTCGGCA
GGGCTGGATC TCGCTAACGA ACACCGTCTG GCATCCCTCT CTTCTGCCCT GCTCAATAGT
GCACTGCAAA AATGGCAGGC CTTGCCAATG CTGGAACAAC CGGTAGCGGC AGGTGAGATG
TCGCCCGTTA TTAACCCGGC GGAACCGAAA GATATTGTGG GCTATGTACG TGAAGCCACG
CCGCGTGAAG TAGAGCAGGC GCTGGAAAGT GCGGTTAATA ACGCGCCAAT CTGGTTTGCC
ACTCCTCCGG CTGAACGCGC GGCGATTTTG CATCGCGCTG CCGTGCTGAT GGAAAGCCAG
ATGCAGCAAC TGATTGGTAT TCTGGTGCGT GAAGCCGGAA AAACCTTCAG TAACGCCATT
GCCGAAGTGC GTGAAGCGGT CGATTTTCTC CACTACTACG CCGGACAGGT GCGGGATGAT
TTCGCTAACG AAACCCATCG TCCATTAGGG CCTGTGGTAT GTATCAGCCC GTGGAACTTC
CCGCTGGCGA TTTTCACCGG GCAGATCGCT GCCGCACTGG CGGCAGGTAA CAGCGTACTG
GCAAAACCGG CAGAACAAAC GCCACTGATT GCCGCGCAAG GGATCGCCAT TTTGCTGGAA
GCGGGCGTAC CGCCAGGCGT GGTGCAATTG CTGCCAGGTC GGGGTGAAAC CGTGGGCGCG
CAACTGACGG GTGATGATCG CGTACGCGGG GTGATGTTTA CCGGTTCAAC CGAAGTCGCT
ACGTTACTGC AGCGCAATAT CGCCAGCCGC CTCGACGCTC AGGGTCGCCC TATTCCGCTC
ATCGCTGAAA CCGGCGGCAT GAACGCGATG ATTGTCGATT CTTCAGCACT GACCGAACAA
GTCGTAATAG ATGTGCTGGC CTCGGCGTTC GACAGTGCGG GTCAGCGTTG TTCGGCGCTG
CGCGTGCTGT GCCTGCAAGA TGAGATTGCC GACCACACGT TGAAAATGCT GCGCGGCGCA
ATGGCCGAAT GCCGGATGGG TAATCCGGGT CGCCTGACCA CCGATATCGG TCCGGTGATT
GATAGCGAAG CGAAAGCCAA TATTGAGCGC CATATTCAGA CCATGCGTAG CAAAGGCCGT
CCGGTGTTCC AGGCGGTGCG GGAAAACAGC GAAGATGCCC GTGAATGGCA AAGCGGCACC
TTTGTCGCCC CGACGCTGAT CGAACTGGAT GACTTTGCCG AATTGCAAAA AGAGGTCTTT
GGTCCGGTGC TGCATGTGGT GCGTTATAAC CGTAATCAGC TGCCGGAGCT GATCGAGCAG
ATTAACGCTT CCGGCTATGG TCTGACGCTT GGCGTTCATA CGCGTATTGA TGAAACCATC
GCCCAGGTCA CTGGCTCAGC CCATGTTGGT AACCTGTATG TTAACCGTAA TATGGTGGGC
GCAGTGGTTG GGGTGCAGCC ATTCGGCGGC GAAGGGTTGT CCGGTACCGG GCCGAAAGCA
GGCGGTCCGC TCTATCTCTA CCGTCTGCTG GCGAATCGCC CGGAAAGTGC GCTGGCGGTG
ACACTCGCGC GTCAGGATGC AGAGTATCCG GTCGATGCGC AGTTGAAAGC CGCATTGACT
CAGCCGCTAA ATGCACTGCG GGAATGGGCA GCAAATCGTC CAGAATTGCA GGCGTTATGT
ACGCAATATG GCGAGCTGGC GCAGGCAGGA ACACAACGAT TGCTGCCAGG GCCGACGGGT
GAGCGCAACA CCTGGACGCT GCTGCCGCGT GAGCGCGTAT TGTGTATCGC GGATGATGAA
CAGGATGCGC TGACTCAGCT CGCCGCCGTG CTGGCGGTGG GCAGCCAGGT GCTGTGGCCA
GATGACGCGC TGCATCGTCA GTTAGTGAAG GCATTGCCAT CGACTGTCAG CGAGCGTATT
CAACTGGCGA AAGCGGAAAA TATTACCGCT CAACCGTTTG ATGCGGTGAT CTTCCACGGT
GATTCGGATC AGCTTCGCGC ATTGTGTGAA GCAGTTGCCG CGCGGGATGG CGCAATTGTT
TCGGTGCAGG GTTTTGCCCG TGGCGAAAGC AATATCCTGC TGGAACGGCT GTATATCGAG
CGTTCGCTGA GTGTGAATAC CGCTGCCGCT GGCGGTAACG CCAGCTTAAT GACGATCGGT
TAA
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| Protein sequence | MGTTTMGVKL DDATRERIKS AATRIDRTPH WLIKQAIFSY LEQLENSDTL PELPALLSGA
ANESDEAPTP AEEPHQPFLD FAEQILPQSV SRAAITAAYR RPETEAVSML LEQARLPQPV
AEQAHKLAYQ LADKLRNQKN ASGRAGMVQG LLQEFSLSSQ EGVALMCLAE ALLRIPDKAT
RDALIRDKIS NGNWQSHIGR SPSLFVNAAT WGLLFTGKLV STHNEASLSR SLNRIIGKSG
EPLIRKGVDM AMRLMGEQFV TGETIAEALA NARKLEEKGF RYSYDMLGEA ALTAADAQAY
MVSYQQAIHA IGKASNGRGI YEGPGISIKL SALHPRYSRA QYDRVMEELY PRLKSLTLLA
RQYDIGINID AEEADRLEIS LDLLEKLCFE PELAGWNGIG FVIQAYQKRC PLVIDYLIDL
ATRSRRRLMI RLVKGAYWDS EIKRAQMDGL EGYPVYTRKV YTDVSYLACA KKLLAVPNLI
YPQFATHNAH TLAAIYQLAG QNYYPGQYEF QCLHGMGEPL YEQVTGKVAD GKLNRPCRIY
APVGTHETLL AYLVRRLLEN GANTSFVNRI ADTSLPLDEL VADPVTAVEK LAQQEGQTGL
PHPKIPLPRD LYGHGRDNSA GLDLANEHRL ASLSSALLNS ALQKWQALPM LEQPVAAGEM
SPVINPAEPK DIVGYVREAT PREVEQALES AVNNAPIWFA TPPAERAAIL HRAAVLMESQ
MQQLIGILVR EAGKTFSNAI AEVREAVDFL HYYAGQVRDD FANETHRPLG PVVCISPWNF
PLAIFTGQIA AALAAGNSVL AKPAEQTPLI AAQGIAILLE AGVPPGVVQL LPGRGETVGA
QLTGDDRVRG VMFTGSTEVA TLLQRNIASR LDAQGRPIPL IAETGGMNAM IVDSSALTEQ
VVIDVLASAF DSAGQRCSAL RVLCLQDEIA DHTLKMLRGA MAECRMGNPG RLTTDIGPVI
DSEAKANIER HIQTMRSKGR PVFQAVRENS EDAREWQSGT FVAPTLIELD DFAELQKEVF
GPVLHVVRYN RNQLPELIEQ INASGYGLTL GVHTRIDETI AQVTGSAHVG NLYVNRNMVG
AVVGVQPFGG EGLSGTGPKA GGPLYLYRLL ANRPESALAV TLARQDAEYP VDAQLKAALT
QPLNALREWA ANRPELQALC TQYGELAQAG TQRLLPGPTG ERNTWTLLPR ERVLCIADDE
QDALTQLAAV LAVGSQVLWP DDALHRQLVK ALPSTVSERI QLAKAENITA QPFDAVIFHG
DSDQLRALCE AVAARDGAIV SVQGFARGES NILLERLYIE RSLSVNTAAA GGNASLMTIG
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