Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_1251 |
Symbol | putA |
ID | 6970285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 1258018 |
End bp | 1261980 |
Gene Length | 3963 bp |
Protein Length | 1320 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643385243 |
Product | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_002269738 |
Protein GI | 209398214 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.63555 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAACCA CCACCATGGG GGTTAAGCTG GACGACGCGA CGCGTGAGCG TATTAAGTCT GCCGCGACAC GTATCGATCG CACGCCACAC TGGTTAATTA AGCAGGCGAT TTTTTCTTAT CTCGAACAAC TGGAAAACAG CGATACTCTG CCAGAGCTAC CTGCGCTGCT TTCTGGCGCT GCCAATGAGA GCGATGAAGC ACCGACTCCG GCAGAGGAAC CACACCAGCC ATTCCTCGAC TTTGCCGAGC AAATTTTGCC CCAGTCGGTT TCCCGCGCTG CGATCACCGC GGCCTATCGC CGCCCGGAAA CCGAAGCGGT TTCTATGCTG CTGGAACAAG CCCGCCTGCC GCAACCAGTT GCTGAACAGG CACACAAACT GGCGTATCAA CTGGCCGATA AACTGCGTAA TCAAAAAAAT GCCAGTGGCC GCGCAGGTAT GGTCCAGGGG TTATTGCAGG AGTTTTCGCT GTCATCGCAG GAAGGCGTGG CGCTGATGTG TCTGGCAGAA GCGTTGTTGC GTATTCCCGA CAAAGCCACC CGTGATGCGT TAATTCGCGA CAAAATCAGC AACGGTAACT GGCAGTCACA CATTGGTCGT AGCCCGTCAC TGTTTGTTAA TGCCGCTACC TGGGGGCTGT TGTTTACTGG CAAACTGGTT TCCACCCATA ACGAAGCCAG CCTCTCCCGC TCGCTGAACC GCATTATCGG TAAGAGCGGT GAACCGCTGA TCCGCAAAGG TGTGGATATG GCAATGCGCC TGATGGGCGA GCAGTTCGTC ACGGGCGAAA CCATCGCGGA AGCGTTAGCC AATGCCCGCA AGCTGGAAGA GAAAGGTTTC CGTTACTCTT ACGATATGCT CGGCGAAGCT GCACTGACTG CCGCAGACGC ACAGGCGTAC ATGGTTTCCT ATCAGCAGGC GATTCACGCC ATTGGTAAAG CGTCTAACGG TCGTGGCATC TATGAAGGTC CGGGCATTTC AATCAAGCTG TCGGCGCTGC ATCCGCGTTA CAGCCGCGCC CAGTATGACC GGGTAATGGA AGAGCTTTAC CCGCGTCTGA AATCACTCAC CCTGCTGGCG CGTCAGTACG ATATTGGTAT CAACATTGAC GCCGAAGAGG CCGATCGTCT GGAGATCTCC CTCGATCTGC TGGAAAAACT CTGTTTCGAG CCAGAGCTGG CAGGCTGGAA CGGCATCGGT TTTGTTATTC AGGCTTATCA AAAACGCTGC CCGCTGGTGA TTGATTACCT GATTGATCTC GCCACCCGCA GCCGTCGCCG TCTTATGATT CGCCTGGTGA AAGGCGCGTA CTGGGATAGT GAAATCAAGC GCGCGCAGAT GGACGGCCTT GAAGGTTATC CGGTTTATAC CCGCAAGGTA TATACCGACG TTTCTTATCT CGCCTGTGCG AAAAAGCTGC TGGCGGTGCC GAATCTAATC TACCCGCAGT TCGCAACGCA CAACGCCCAC ACGCTGGCGG CGATTTATCA ACTGGCAGGT CAGAACTACT ATCCGGGTCA GTACGAGTTC CAGTGCCTGC ATGGTATGGG CGAGCCGCTG TATGAGCAGG TCACCGGGAA AGTTGCCGAC GGCAAACTTA ACCGTCCGTG TCGTATTTAT GCCCCGGTCG GCACACATGA AACGCTGCTG GCGTATCTGG TGCGCCGCCT GCTGGAAAAC GGTGCTAACA CCTCGTTTGT TAACCGTATT GCCGATACCT CTTTGCCACT GGATGAACTG GTCGCCGATC CGGTCACTGC TGTAGAAAAA CTGGCACAAC AGGAAGGGCA AACTGGATTA CCGCATCCGA AAATTCCCCT GCCGCGCGAT CTTTACGGTC ACGGGCGCGA CAACTCGGCA GGGCTGGATC TCGCTAACGA ACACCGTCTG GCATCCCTCT CTTCTGCCCT GCTCAATAGT GCACTGCAAA AATGGCAGGC CTTGCCAATG CTGGAACAAC CGGTAGCGGC AGGTGAGATG TCGCCCGTTA TTAACCCGGC GGAACCGAAA GATATTGTGG GCTATGTACG TGAAGCCACG CCGCGTGAAG TAGAGCAGGC GCTGGAAAGT GCGGTTAATA ACGCGCCAAT CTGGTTTGCC ACTCCTCCGG CTGAACGCGC GGCGATTTTG CATCGCGCTG CCGTGCTGAT GGAAAGCCAG ATGCAGCAAC TGATTGGTAT TCTGGTGCGT GAAGCCGGAA AAACCTTCAG TAACGCCATT GCCGAAGTGC GTGAAGCGGT CGATTTTCTC CACTACTACG CCGGACAGGT GCGGGATGAT TTCGCTAACG AAACCCATCG TCCATTAGGG CCTGTGGTAT GTATCAGCCC GTGGAACTTC CCGCTGGCGA TTTTCACCGG GCAGATCGCT GCCGCACTGG CGGCAGGTAA CAGCGTACTG GCAAAACCGG CAGAACAAAC GCCACTGATT GCCGCGCAAG GGATCGCCAT TTTGCTGGAA GCGGGCGTAC CGCCAGGCGT GGTGCAATTG CTGCCAGGTC GGGGTGAAAC CGTGGGCGCG CAACTGACGG GTGATGATCG CGTACGCGGG GTGATGTTTA CCGGTTCAAC CGAAGTCGCT ACGTTACTGC AGCGCAATAT CGCCAGCCGC CTCGACGCTC AGGGTCGCCC TATTCCGCTC ATCGCTGAAA CCGGCGGCAT GAACGCGATG ATTGTCGATT CTTCAGCACT GACCGAACAA GTCGTAATAG ATGTGCTGGC CTCGGCGTTC GACAGTGCGG GTCAGCGTTG TTCGGCGCTG CGCGTGCTGT GCCTGCAAGA TGAGATTGCC GACCACACGT TGAAAATGCT GCGCGGCGCA ATGGCCGAAT GCCGGATGGG TAATCCGGGT CGCCTGACCA CCGATATCGG TCCGGTGATT GATAGCGAAG CGAAAGCCAA TATTGAGCGC CATATTCAGA CCATGCGTAG CAAAGGCCGT CCGGTGTTCC AGGCGGTGCG GGAAAACAGC GAAGATGCCC GTGAATGGCA AAGCGGCACC TTTGTCGCCC CGACGCTGAT CGAACTGGAT GACTTTGCCG AATTGCAAAA AGAGGTCTTT GGTCCGGTGC TGCATGTGGT GCGTTATAAC CGTAATCAGC TGCCGGAGCT GATCGAGCAG ATTAACGCTT CCGGCTATGG TCTGACGCTT GGCGTTCATA CGCGTATTGA TGAAACCATC GCCCAGGTCA CTGGCTCAGC CCATGTTGGT AACCTGTATG TTAACCGTAA TATGGTGGGC GCAGTGGTTG GGGTGCAGCC ATTCGGCGGC GAAGGGTTGT CCGGTACCGG GCCGAAAGCA GGCGGTCCGC TCTATCTCTA CCGTCTGCTG GCGAATCGCC CGGAAAGTGC GCTGGCGGTG ACACTCGCGC GTCAGGATGC AGAGTATCCG GTCGATGCGC AGTTGAAAGC CGCATTGACT CAGCCGCTAA ATGCACTGCG GGAATGGGCA GCAAATCGTC CAGAATTGCA GGCGTTATGT ACGCAATATG GCGAGCTGGC GCAGGCAGGA ACACAACGAT TGCTGCCAGG GCCGACGGGT GAGCGCAACA CCTGGACGCT GCTGCCGCGT GAGCGCGTAT TGTGTATCGC GGATGATGAA CAGGATGCGC TGACTCAGCT CGCCGCCGTG CTGGCGGTGG GCAGCCAGGT GCTGTGGCCA GATGACGCGC TGCATCGTCA GTTAGTGAAG GCATTGCCAT CGACTGTCAG CGAGCGTATT CAACTGGCGA AAGCGGAAAA TATTACCGCT CAACCGTTTG ATGCGGTGAT CTTCCACGGT GATTCGGATC AGCTTCGCGC ATTGTGTGAA GCAGTTGCCG CGCGGGATGG CGCAATTGTT TCGGTGCAGG GTTTTGCCCG TGGCGAAAGC AATATCCTGC TGGAACGGCT GTATATCGAG CGTTCGCTGA GTGTGAATAC CGCTGCCGCT GGCGGTAACG CCAGCTTAAT GACGATCGGT TAA
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Protein sequence | MGTTTMGVKL DDATRERIKS AATRIDRTPH WLIKQAIFSY LEQLENSDTL PELPALLSGA ANESDEAPTP AEEPHQPFLD FAEQILPQSV SRAAITAAYR RPETEAVSML LEQARLPQPV AEQAHKLAYQ LADKLRNQKN ASGRAGMVQG LLQEFSLSSQ EGVALMCLAE ALLRIPDKAT RDALIRDKIS NGNWQSHIGR SPSLFVNAAT WGLLFTGKLV STHNEASLSR SLNRIIGKSG EPLIRKGVDM AMRLMGEQFV TGETIAEALA NARKLEEKGF RYSYDMLGEA ALTAADAQAY MVSYQQAIHA IGKASNGRGI YEGPGISIKL SALHPRYSRA QYDRVMEELY PRLKSLTLLA RQYDIGINID AEEADRLEIS LDLLEKLCFE PELAGWNGIG FVIQAYQKRC PLVIDYLIDL ATRSRRRLMI RLVKGAYWDS EIKRAQMDGL EGYPVYTRKV YTDVSYLACA KKLLAVPNLI YPQFATHNAH TLAAIYQLAG QNYYPGQYEF QCLHGMGEPL YEQVTGKVAD GKLNRPCRIY APVGTHETLL AYLVRRLLEN GANTSFVNRI ADTSLPLDEL VADPVTAVEK LAQQEGQTGL PHPKIPLPRD LYGHGRDNSA GLDLANEHRL ASLSSALLNS ALQKWQALPM LEQPVAAGEM SPVINPAEPK DIVGYVREAT PREVEQALES AVNNAPIWFA TPPAERAAIL HRAAVLMESQ MQQLIGILVR EAGKTFSNAI AEVREAVDFL HYYAGQVRDD FANETHRPLG PVVCISPWNF PLAIFTGQIA AALAAGNSVL AKPAEQTPLI AAQGIAILLE AGVPPGVVQL LPGRGETVGA QLTGDDRVRG VMFTGSTEVA TLLQRNIASR LDAQGRPIPL IAETGGMNAM IVDSSALTEQ VVIDVLASAF DSAGQRCSAL RVLCLQDEIA DHTLKMLRGA MAECRMGNPG RLTTDIGPVI DSEAKANIER HIQTMRSKGR PVFQAVRENS EDAREWQSGT FVAPTLIELD DFAELQKEVF GPVLHVVRYN RNQLPELIEQ INASGYGLTL GVHTRIDETI AQVTGSAHVG NLYVNRNMVG AVVGVQPFGG EGLSGTGPKA GGPLYLYRLL ANRPESALAV TLARQDAEYP VDAQLKAALT QPLNALREWA ANRPELQALC TQYGELAQAG TQRLLPGPTG ERNTWTLLPR ERVLCIADDE QDALTQLAAV LAVGSQVLWP DDALHRQLVK ALPSTVSERI QLAKAENITA QPFDAVIFHG DSDQLRALCE AVAARDGAIV SVQGFARGES NILLERLYIE RSLSVNTAAA GGNASLMTIG
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