Gene ECH74115_1248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1248 
Symbol 
ID6969502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1255269 
End bp1255964 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content55% 
IMG OID643385240 
Productputative isochorismatase family protein, rutB 
Protein accessionYP_002269735 
Protein GI209400895 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID[TIGR03614] pyrimidine utilization protein B 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACGA CATTAACCGC TCGACCGGAA GCCATTACCT TCGATCCGCA GCAAAGTGCG 
CTGATCGTGG TGGATATGCA AAACGCCTAT GCCACGCCAG GCGGCTACTT AGATCTCGCC
GGGTTTGATG TCTCAACCAC TCGCCCGGTC ATTGCCAACA TTCAAACCGC CGTGACCGCA
GCGCGAGCGG CAGGGATGTT GATCATCTGG TTTCAAAATG GCTGGGATGA ACAGTATGTC
GAGGCTGGCG GCCCTGGCTC ACCGAATTTT CATAAATCGA ACGCCCTCAA AACCATGCGT
AAACAGCCGC AGCTGCAGGG GAAATTGCTG GCGAAAGGCT CCTGGGATTA TCAACTGGTG
GATGAACTGG TGCCGCAGCC TGGCGATATT GTGCTGCCGA AGCCGCGCTA CAGCGGTTTC
TTCAATACGC CGCTGGACAG CATTTTGCGC AGCCGCGGAA TACGCCATCT GGTTTTCACC
AGCATCGCTA CCAACGTCTG CGTCGAATCG ACGCTACGCG ATGGCTTTTT TCTGGAGTAT
TTCGGCGTGG TGCTGGAAGA CGCAACACAC CAGGCGGGGC CGGAATTTGT ACAGAAAGCC
GCGTTGTTCA ATATCGAAAC CTTTTTTGGC TGGGTCAGCG ACGTCGAAAC GTTCTGCGAC
GCGCTTTCTC CCACGTCCTT TGCTCGTATC GCTTAA
 
Protein sequence
MMTTLTARPE AITFDPQQSA LIVVDMQNAY ATPGGYLDLA GFDVSTTRPV IANIQTAVTA 
ARAAGMLIIW FQNGWDEQYV EAGGPGSPNF HKSNALKTMR KQPQLQGKLL AKGSWDYQLV
DELVPQPGDI VLPKPRYSGF FNTPLDSILR SRGIRHLVFT SIATNVCVES TLRDGFFLEY
FGVVLEDATH QAGPEFVQKA ALFNIETFFG WVSDVETFCD ALSPTSFARI A