| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1220 |
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| Symbol | ymcA |
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| ID | 6969340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 1230013 |
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| End bp | 1232109 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643385215 |
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| Product | group 4 capsule (G4C) polysaccharide, lipoprotein YmcA |
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| Protein accession | YP_002269710 |
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| Protein GI | 209395798 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.221159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA ATTCTTATCT TTTAAGCTGC CTGGCCATTG CCGTCTCCAG TGCCTGTCAT
GCTGAAGTAT TAACCTACCC GGATCCGCTG GGTTCGTCGC AATCGGACTT TGGCGGCACA
GGATTGTTGC AGATGCCAAA TGCGCGCATC GCACCGGAAG GTGAATTCAG CGTCAACTAC
CGGGATAACG ATCAATACCG TTTCTACTCC ACCTCCGTGG CGCTGTTTCC ATGGCTGGAA
GGCACCATTC GTTATACGGA TGTGCGCACA CGTAAATATA GCCAGTGGGA AGATTTCAGC
GGCGATCAGT CATACAAAGA CAAATCATTC GATTTTAAAC TTCGCCTGTG GGAAGAAGGT
TACTGGCTAC CGCAAGTGGC GTTTGGTAAA CGTGATATTG CTGGTACGGG TCTGTTTGAC
GGTGAGTATC TGGTGGCCAG CAAGCAAGCG GGGCCATTTG ATTTCACCCT CGGGATGGCA
TGGGGCTACG CCGGTAATGC GGGCAATATT ACCAACCCGT TTTGCCGGGT GAGCGATAAA
TATTGTCATC GCGCAGAGTC TCACGATGCG GGCGATATCA GCTTTAGCGA TATCTTTCGT
GGCCCGGCTT CCATCTTTGG CGGCATTGAG TATCAAACGC CGTGGAATCC CCTGCGTCTG
AAACTCGAAT ACGACGGCAA CAATTACCAG AATGATTTCG CTGGCAAACT GCCTCAGGCA
AGCCATTTCA ACGTCGGTGC AGTTTATCGC GCTGCCAGCT GGGCAGACCT CAACCTGAGT
TATGAACGCG GTAACACGTT GATGTTTGGT TTCACTTTAC GGACCAATTT CAACGATCTG
CGCCCTGCCC TGCGCGATAC GCCAAAACCG GCATATCAAC CTGCGCCTGA ATCTGAAGGA
TTGCAGTACA CCACGGTAGC AAACCAACTT ACCGCCCTGA AGTATAACGC GGGCTTTGAC
GCGCCAGAAA TTCAGCTACG CGATAAGACG CTGTATATGT CTGGTCAGCA ATACAAATAC
CGTGACTCTC GTGAAGCGGT CGATCGTGCC AACCGGATTC TGGTGAATAA CCTGCCGCAA
GGCGTTGAGA AGATTAGCGT GACGCAAAAG CGCGAGCATA TGGCGATGGT GACTACCGAA
ACCGACGTAG CCAGCCTGCG CAAACAGCTG GCAGGTACAG CGCCTGGTCA ATCAGAGCCA
CTGCAACAAC AACGTGTTGA AGCTGAAGAT CTTTCTGCCT TTGGTCGGGG CTACCGTATT
CGTGAAGATC GCTTTAGCTA CTCTTTCAAC CCAACACTTT CACAGTCGCT GGGCGGCCCG
GAAGATTTCT ATATGTTCCA GCTGGGGCTG ATGTCCAGCG CCCGCTACTG GTTTACCGAC
CACCTGCTGC TTGATGGCGG TATTTTCACC AATATTTACA ACAACTACGA CAAGTTTAAG
TCTTCGCTGT TGCCCGCGGA CTCTACCCTG CCCCGCGTGC GCACGCATAT CCGTGATTAC
GTTCGCAATG ACGTTTATCT CAACAACTTG CAAGCGAATT ACTTTGCCGA CTTAGGCAAT
GGTTTCTATG GCCAGGTGTA TGGCGGTTAT CTGGAAACGA TGTATGCCGG TGTCGGTTCC
GAGCTGCTTT ATCGCCCGCT AGATGCCAGC TGGGCGCTGG GTGTGGACGT TAACTACGTG
AAGCAGCGTG ACTGGGACAA CATGATGCGC TTCACCGATT ATTCCACGCC AACTGGTTTC
GTGACGGCTT ACTGGAACCC GCCGACGCTC AATGGCGTAC TGATGAAACT TAGCGTTGGG
CAATATCTGG CAAAAGATAA AGGGGCAACG ATCGACGTCG CCAAACGCTT TGACAGCGGC
GTGGCGGTAG GGGTATGGGC GGCAATCAGT AACGTATCTA AAGATGACTA CGGCGAAGGC
GGCTTTAGTA AAGGTTTTTA TATCTCGATT CCGTTCGACT TGATGACCAT TGGACCTAAC
CGCAACCGCG CGGTGGTTTC GTGGACACCA TTGACGCGTG ATGGTGGACA AATGCTGTCA
CGCAAATACC AGCTCTATCC AATGACGGCA GAGCGAGAAG TACCGGTTGG ACAATAA
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| Protein sequence | MKKNSYLLSC LAIAVSSACH AEVLTYPDPL GSSQSDFGGT GLLQMPNARI APEGEFSVNY
RDNDQYRFYS TSVALFPWLE GTIRYTDVRT RKYSQWEDFS GDQSYKDKSF DFKLRLWEEG
YWLPQVAFGK RDIAGTGLFD GEYLVASKQA GPFDFTLGMA WGYAGNAGNI TNPFCRVSDK
YCHRAESHDA GDISFSDIFR GPASIFGGIE YQTPWNPLRL KLEYDGNNYQ NDFAGKLPQA
SHFNVGAVYR AASWADLNLS YERGNTLMFG FTLRTNFNDL RPALRDTPKP AYQPAPESEG
LQYTTVANQL TALKYNAGFD APEIQLRDKT LYMSGQQYKY RDSREAVDRA NRILVNNLPQ
GVEKISVTQK REHMAMVTTE TDVASLRKQL AGTAPGQSEP LQQQRVEAED LSAFGRGYRI
REDRFSYSFN PTLSQSLGGP EDFYMFQLGL MSSARYWFTD HLLLDGGIFT NIYNNYDKFK
SSLLPADSTL PRVRTHIRDY VRNDVYLNNL QANYFADLGN GFYGQVYGGY LETMYAGVGS
ELLYRPLDAS WALGVDVNYV KQRDWDNMMR FTDYSTPTGF VTAYWNPPTL NGVLMKLSVG
QYLAKDKGAT IDVAKRFDSG VAVGVWAAIS NVSKDDYGEG GFSKGFYISI PFDLMTIGPN
RNRAVVSWTP LTRDGGQMLS RKYQLYPMTA EREVPVGQ
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