Gene ECH74115_1192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1192 
Symbol 
ID6968272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1200915 
End bp1201577 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content55% 
IMG OID643385189 
Productmajor tail protein V 
Protein accessionYP_002269685 
Protein GI209396013 
COG category[N] Cell motility 
COG ID[COG5492] Bacterial surface proteins containing Ig-like domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCAGACG ATGACTGGCA GCGACTGGCT AAGGTGAAGG ATCTGACGCC GGGCGAGATG 
ACGGCAGAAT CCTACGATGA TAACTACCTG GATGATGAAG ACGCGGACTG GACCGCGACC
GGGCAGGGGC AGAAATCTGC AGGTGATACC AGTTTTACGC TGGCCTGGAA ACCGGGAGAG
GAAGGCCAGA AAGGGCTTAT AGGCTGGTTT GAAAGCGGCG ATGTCCGGGC CTATAAAATC
CGTTTTCCGA ATGGCACGGT GGATGTGTTT CGTGGCTGGG TCAGCAGTAT CGGTAAGGCC
GTGACGGCGA AAGAAGTGAT CACCCGCACG GTGAAAGTCA CTAACGTGGG TAAACCTTCT
GTAGCGGAAG AACGCAGCAA AATTACGCCG GTCAGTGCGA TTAAGGTGAC GCCGACATCC
GGTACGGTGG CAAAAGGGAA AACAACCACC CTGACGGTTT CTTTTGAGCC GGAAAGTGCA
ACAGACAAGA CGTTCAGAGC GGTTTCCGCC GATCCGTCGA AAGCCACCAT TAGTGTGAAA
GATATGACAA TTACGGTAAA CGGCGTGGCG ACAGGTAAGG TGCAGATCCC TGTGGTGAGC
GGAAATGGTC AGTTCGCCGC AGTGGCTGAA GTCACCGTTA CTGAAGCGGG CGCTGCAGGG
TAA
 
Protein sequence
MSDDDWQRLA KVKDLTPGEM TAESYDDNYL DDEDADWTAT GQGQKSAGDT SFTLAWKPGE 
EGQKGLIGWF ESGDVRAYKI RFPNGTVDVF RGWVSSIGKA VTAKEVITRT VKVTNVGKPS
VAEERSKITP VSAIKVTPTS GTVAKGKTTT LTVSFEPESA TDKTFRAVSA DPSKATISVK
DMTITVNGVA TGKVQIPVVS GNGQFAAVAE VTVTEAGAAG