Gene ECH74115_1174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1174 
Symbol 
ID6969313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1188526 
End bp1189059 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content54% 
IMG OID643385173 
Productlysozyme 
Protein accessionYP_002269669 
Protein GI209396035 
COG category[R] General function prediction only 
COG ID[COG3772] Phage-related lysozyme (muraminidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.847559 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAA AAATAAAATA CGGCCTGTCG GCTGCCGTTC TGGCGCTGAT TGGTGCAGGT 
GCTTCTGCGC CTGAAATCCT CGACCAGTTT CTGGATGAAA AGGAAGGTAA CCACACCACG
GCATACCGTG ATGGTGCGGG GATCTGGACC ATCTGCCGTG GTGCCATTCT GGTGGATGGT
AAGCCTGTTA TTCCTGGCAT GAAGCTGTCA AAGGAAAAAT GCGACCGGGT TAATGCCATC
GAACGTGACA AGGCGCTGGC ATGGGTGGAG AAAAACATCC GGGTGCCGCT GACCGAACCC
CAGAAAGCGG GGATCGCGTC ATTCTGTCCG TACAACATTG GCCCCGGTAA GTGCTTCCCG
TCGACGTTTT ATAAACGAAT TAATGCAGGC GATCGAAAAG GTGCCTGTGA GGCGATTCGC
TGGTGGATTA AGGACGGTGG CAGAGACTGC CGTATCCGTT CAAATAATTG CTACGGTCAG
GTCTCACGGC GTGACCAGGA GAGCGCGCTG GCGTGCTGGG ACATCGACAG ATAG
 
Protein sequence
MNEKIKYGLS AAVLALIGAG ASAPEILDQF LDEKEGNHTT AYRDGAGIWT ICRGAILVDG 
KPVIPGMKLS KEKCDRVNAI ERDKALAWVE KNIRVPLTEP QKAGIASFCP YNIGPGKCFP
STFYKRINAG DRKGACEAIR WWIKDGGRDC RIRSNNCYGQ VSRRDQESAL ACWDIDR