Gene ECH74115_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1170 
Symbol 
ID6971521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1185848 
End bp1186738 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content54% 
IMG OID643385169 
ProductIS629, transposase orfB 
Protein accessionYP_002269665 
Protein GI209398429 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.728097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.563398 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCAC TGCTGGATAA GCTGCGTGAG CAGTACGGGG TCGGACCGGT ATGCAGCGAA 
CTGCATATTG CCCCGTCAAC GTATTACCAT TGTCAGCAAC AGCGACATCA TCCGGATAAA
CGCAGTGCCC GTGCGCAGCA CGACGACTGG CTGAAGAGAG AGATACAGCG CGTATACGAT
GAAAATCATC AGGTGTACGG TGTGCGTAAA GTCTGGCGTC AGTTGTTACG GGAAGGAATC
AGGGTGGCCA GATGTACAGT GGCACGTCTC ATGGCGGTTA TGGGACTTGC CGGTGTTCTC
CGGGGTAAAA AGGTCCGTAC GACCATCAGC CGGAAAGCCG TTGCCGCAGG CGACCGCGTA
AACCGTCAGT TCGTGGCAGA ACGACCTGAC CAGCTGTGGG TGGCTGATTT TACTTACGTC
AGCACATGGC AGGGCTTCGT CTATGTGGCG TTTATCATTG ATGTGTTTGC CGGATACATC
GTGGGGTGGC GGGTCTCATC GTCTATGGAA ACGACATTCG TGCTGGATGC GCTGGAGCAG
GCGTTGTGGG CCCGTCGTCC GTCTGGCACC ATCCATCACA GCGATAAAGG CTCTCAGTAT
GTGTCACTGG CCTATACGGA GCGACTAAAA GAAGCCGGAT TACTGGCATC AACAGGGAGT
ACAGGCGACT CGTATGACAA CGCGATGGCT GAGAGCATCA ATGGTCTTTA CAAAGCGGAG
GTAATACACC GTAAGAGCTG GAAAAACCGT GCAGAAGTGG AACTGGCCAC ACTAACGTGG
GTGGACTGGT ATAACAATCG ACGATTGCTG GGAAGGCTGG GCCATACTCC TCCGGCAGAA
GCAGAAAAAG CTTATTATGC TTCCATCGGA AACGATGATC TGGCAGCCTG A
 
Protein sequence
MMPLLDKLRE QYGVGPVCSE LHIAPSTYYH CQQQRHHPDK RSARAQHDDW LKREIQRVYD 
ENHQVYGVRK VWRQLLREGI RVARCTVARL MAVMGLAGVL RGKKVRTTIS RKAVAAGDRV
NRQFVAERPD QLWVADFTYV STWQGFVYVA FIIDVFAGYI VGWRVSSSME TTFVLDALEQ
ALWARRPSGT IHHSDKGSQY VSLAYTERLK EAGLLASTGS TGDSYDNAMA ESINGLYKAE
VIHRKSWKNR AEVELATLTW VDWYNNRRLL GRLGHTPPAE AEKAYYASIG NDDLAA