| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1139 |
|---|
| Symbol | |
|---|
| ID | 6967605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 1165946 |
|---|
| End bp | 1168417 |
|---|
| Gene Length | 2472 bp |
|---|
| Protein Length | 823 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643385142 |
|---|
| Product | exonuclease family protein |
|---|
| Protein accession | YP_002269641 |
|---|
| Protein GI | 209396180 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.53396 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAA TCTTTATTTG CGCTGCTATT CCTGACGAAC AGGCCATAAA AGAAGATAGC
GCTGTTGCGG TGGCCACTGC CATTGAAGCC GGTGATGAGC GTCGCGCACG CGCAAAATTT
CACTGGCAAT TTCTGGAGCA ATTCCCGGCA GCTCAGGACT GCGCTTATAA ATTTATTGTC
TGCGAGGATA AACCCGGCAT ACCCCGCCCT GCCCTCGATT CCTGGGATAC CGAATATATG
CAGGAAAACC GCTGGGATGA GGAGTCAGCT TCCTTTGTAC CGGTCGAACC AGAATCCGAT
CCGATGAACG TCAATTTTGA CAAGCTGTCC CCTGAAGTAC AGAACGCAGT CCTGGTTAAA
TTCGACACAT GCGAAAACAT CACCGTTGAT ATGGTGATTA GCGCACAGGA ATTACTACAG
GAAGACATGG CAACATTCGG CGGACATATC GTTGAAGCGT TGATGAAAAT GCCAGAAGTT
AACGCCATGT ATCCTGAACT TAAACTGCAT GCCATCGGGT GGGTTAAGCA TAAATGTGAG
CCTGGCGCTA AATGGCCTGA AATTCAGGCA GAGATGCGCA TCTGGAAAAA ACGTCGCGAA
GGTGAACGCA AGGAAACCGG AAAATACACG TCTGTTGTTG ATCTCACCCG CGCCAGAGTC
AACCAACAGA ACACTGAAAA CGCTGCTGAA AAAACCGGGG CTGTCACTGT TGCCATTCGC
CGCGAATACA AACAGACATG GAAAACACTC GACAATGAAC TGGCCTGCGC CCTCTGGCCC
GGTGATGTGG ATGCAGGAAA CATTGACGGT ACCATCCATC GCTGGGCGAC AAATGAGGTT
ATCGACAAGG ATCGCGAAGA CTGGAAGCGT ATCTCAGCAT CAATGCGCAA ACAGCCCGAA
GCACTTGGCT ATGACCGTCA GACTATTTTT GGCCTTGTTC GCGAACGTCC GATCGATATT
CACAAAGATC CCGTTGCACT GAACAAATAT ATCAGTGAAT ACCTGACGAC AAAGGGCGTG
TTTGAACATG AAGAAACAGA CCAGAGCTCT ACTGATGCTC TCCAGCCGTC AGCAGCACAA
ACTGCTCCAG TGGAGACGGC AGAATCCGAT ACTCAAAAAA ATGAAATCCT GGTGGAAGCT
GAACCATCTG TAGAGCGTGA AGGACCATTT TATTTCGTCT TTACCGATAA GGGCGGGGAA
AAATACGGCA GGGCAAACAA ACTTTCTGGT CTGGACAAGG CGCTGGCTGC CGGCGGTACC
GAAATCTCAA AAGAAGAATA TTTTGCCCGA AAAAATGGCA CATACACGGG CTTACCGCAA
AATGTGGATA CCGCTGAAGA TTCCGAACAA TCAGAGCCGG TAAAAGTTAC CGCTGACGAA
GTAAACAAAA TTATGCAGGC AGCCAATATC AGCCAGCCTG ACGCCGATAA ATTGCTTGCT
GCATCACGTG GTGAATTTGT TGAAGGGATT AGCGACCCGA ATGATCCGAA ATGGGTGAAA
GGGATCCAGA GTCGCGACGC TGAGGACCAG AATCAGCCCA ACGTGAAACA AAATGAGCCA
GAAGCGGAAC AAAACAGCCC GGATACGCAA CAAAACGGGC CAGAAGAACA ACAACCAGAA
CCAGCAGTGC AACAGGAACT GGAAAAAGTT TGCACCGCAT GCGGTCAGAC CGGTGGCGGC
AACTGTCCTG ACTGTGGTGC GGTGATGGGG AACGCAACCT ACCTGGAAAC ATTCGATGAA
GAGAATCAGG CTGAAGCTCA GAAAAATGAT CCGGAGGAAA TGGAAGGCAC TGAACATCTG
CACAAGGAGA ACACTGGCAG CGATCAGTAT CACGCCAGCG ATAATAAAAC TGGCGAAACA
GCAAATCCCT TAATTAAAGT GAACGGTCAT CATGAAATCT CATCCACCAG CAGGTTGTGG
CACCATCTGA TGATTGACCT TGAAACAATG GGAAAAAATC CTGATGCGCC AATAAACTCT
ATAGCCGGTA AGTTTTTTGA TCCGGCAACC GGAGAGATGG GGCCAGAATT CAGCAAAACT
ATCGATCTGG AAACCGCAGG TGGGGTCATC GATCGGGACA CCATTAAGTG GTGGCTGAAA
CAGTCACGCG AAGCACAATC CTCCATTCTG ACCGATGAAA TCACGTTGGA TGATGCACTG
CTGCAATTCC GGGAATTTAT CGACGAAAAC TCCGGTGAAT TTTTTGTTCA GGTCTGGGGT
AACGGTGCAA CTTTCGACAA CGTGATTTTA CGCCGTTCAT ATGAACGGCA GGGGATCCCC
TGCCCGTGGC GTTACACCAA TGATCGCGAT GTAAGAACGA TGGTTGCTCT GGGACTGGTG
ATGGATTTCG ACGCAAGAAC GACTATTCCA TTCGAAGGTG AACGCCATAA CGCCCTGCAC
GATGCACGTT ACCAGGCGAA ATACGTTTCA GCCATCTGGC AAAAACTGCT CCCGAGTCAG
GCTGATTTTT GA
|
|---|
| Protein sequence | MSKIFICAAI PDEQAIKEDS AVAVATAIEA GDERRARAKF HWQFLEQFPA AQDCAYKFIV
CEDKPGIPRP ALDSWDTEYM QENRWDEESA SFVPVEPESD PMNVNFDKLS PEVQNAVLVK
FDTCENITVD MVISAQELLQ EDMATFGGHI VEALMKMPEV NAMYPELKLH AIGWVKHKCE
PGAKWPEIQA EMRIWKKRRE GERKETGKYT SVVDLTRARV NQQNTENAAE KTGAVTVAIR
REYKQTWKTL DNELACALWP GDVDAGNIDG TIHRWATNEV IDKDREDWKR ISASMRKQPE
ALGYDRQTIF GLVRERPIDI HKDPVALNKY ISEYLTTKGV FEHEETDQSS TDALQPSAAQ
TAPVETAESD TQKNEILVEA EPSVEREGPF YFVFTDKGGE KYGRANKLSG LDKALAAGGT
EISKEEYFAR KNGTYTGLPQ NVDTAEDSEQ SEPVKVTADE VNKIMQAANI SQPDADKLLA
ASRGEFVEGI SDPNDPKWVK GIQSRDAEDQ NQPNVKQNEP EAEQNSPDTQ QNGPEEQQPE
PAVQQELEKV CTACGQTGGG NCPDCGAVMG NATYLETFDE ENQAEAQKND PEEMEGTEHL
HKENTGSDQY HASDNKTGET ANPLIKVNGH HEISSTSRLW HHLMIDLETM GKNPDAPINS
IAGKFFDPAT GEMGPEFSKT IDLETAGGVI DRDTIKWWLK QSREAQSSIL TDEITLDDAL
LQFREFIDEN SGEFFVQVWG NGATFDNVIL RRSYERQGIP CPWRYTNDRD VRTMVALGLV
MDFDARTTIP FEGERHNALH DARYQAKYVS AIWQKLLPSQ ADF
|
|---|
| |