Gene ECH74115_1128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1128 
Symbol 
ID6966560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1159937 
End bp1160599 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content51% 
IMG OID643385133 
Producthypothetical protein 
Protein accessionYP_002269632 
Protein GI209398735 
COG category[S] Function unknown 
COG ID[COG3110] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.52869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.229343 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCG GCATCGTGAC CACCTTGATT GCATTATGTT TGCCGGTATC CGTTTTTGCC 
ACCACGCTGC GGCTTTCAAC CGATGTCGAT CTTCTGGTAC TCGACGGCAA GAAGGTTTCC
AGCTCTCTGC TGCGCGGTGC GGACAGCATT GAACTGGATA ATGGACCGCA TCAGTTAGTG
TTTCGCGTTG AGAAGACGAT TCATCTTTCC AATAGTGAAG AACGGCTGTA TATCTCCCCA
CCGCTGGTGG TCAGTTTTAA TACCCAGCTC ATCAACCAGG TCAATTTTCG CCTGCCTCGC
CTGGAGAATG AGCGGGAAGC TAACCATTTT GATGCCGCGC CGCGCCTTGA ATTGTTGGAT
GGCGATGCGA CGCCGATTCC GGTAAAGCTG GATATTCTCG CCATTACCTC AACGGCAAAA
ACGATTGATT ATGAGGTCGA GGTTGAACGC TATAACAAAT CCGCGAAACG CGCTTCACTA
CCGCAATTTG CCACGATGAT GGCAGATGAC AGTACGCTGC TTTCGGGTGT TTCCGAGCTG
GATGCTATTC CACCGCAGTC TCAGGTGCTC ACAGAACAAC GGCTGAAGTA TTGGTTTAAA
CTGGCTGACC CACAAACGCG AAATACTTTC CTGCAATGGG CGGAAAAACA ACCATCTTCC
TGA
 
Protein sequence
MKTGIVTTLI ALCLPVSVFA TTLRLSTDVD LLVLDGKKVS SSLLRGADSI ELDNGPHQLV 
FRVEKTIHLS NSEERLYISP PLVVSFNTQL INQVNFRLPR LENEREANHF DAAPRLELLD
GDATPIPVKL DILAITSTAK TIDYEVEVER YNKSAKRASL PQFATMMADD STLLSGVSEL
DAIPPQSQVL TEQRLKYWFK LADPQTRNTF LQWAEKQPSS