| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1126 |
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| Symbol | helD |
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| ID | 6971402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 1157297 |
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| End bp | 1159351 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643385131 |
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| Product | DNA helicase IV |
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| Protein accession | YP_002269630 |
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| Protein GI | 209400242 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.440253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.367013 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTGA AAGCGACAAC GCTTGGAAAA CGTCTGGCAC AGCACCCTTA CGATCGGGCG
GTGATCCTCA ATGCCGGGAT TAAAGTCTCC GGCGATCGCC ACGAATACCT TATTCCTTTC
AATCAATTAC TGGCGATTCA CTGTAAGCGC GGTCTGGTAT GGGGCGAGCT GGAATTTGTA
CTGCCGGACG AAAAAGTGGT GCGTCTGCAC GGTACCGAAT GGGGCGAGAC GCAGCGTTTT
TACCATCATC TTGATGCTCA CTGGCGGCGG TGGAGTGGCG AGATGAGCGA AATTGCGTCT
GGTGTTTTAC GCCAGCAACT GGATTTGATT GCCACGCGCA CTGGAGAAAA TAAATGGCTG
ACGCGTGAGC AAACCTCTGG CGTTCAGCAA CAAATCCGCC AGGCTTTGTC GGCGTTGCCG
TTGCCGGTTA ACCGACTGGA AGAATTCGAT AACTGCCGTG AGGCGTGGCG TAAATGTCAG
GCCTGGTTGA AAGATATTGA AAGCGCTCGG TTGCAGCATA ACCAGGCGTA TACCGAAGCC
ATGCTTACCG AGTATGCGGA TTTTTTCCGC CAGGTCGAGT CTTCACCGCT GAATCCGGCG
CAGGCCCGGG CAGTCGTTAA TGGCGAGCAT TCTCTGTTAG TGCTGGCAGG TGCAGGAAGC
GGAAAAACGT CGGTGCTGGT GGCCCGTGCA GGCTGGTTGC TGGCGCGTGG TGAAGCGTCC
CCTGAGCAAA TTTTATTGCT GGCGTTTGGT CGCAAAGCCG CTGAAGAGAT GGACGAGCGT
ATTCGCGAAC GGCTACATAC CGAAGACATT ACCGCACGCA CGTTTCATGC GCTGGCGCTG
CATATTATTC AGCAGGGCAG CAAAAAAGTT CCGATAGTCA GCAAACTGGA AAATGATACC
GCTGCCCGTC ATGAACTCTT TATTGCTGAG TGGCGCAAGC AATGCAGCGA AAAGAAAGCG
CAGGCGAAGG GCTGGCGGCA ATGGCTGACG GAAGAAATGC AGTGGTCAGT GCCAGAAGGT
AACTTCTGGG ATGATGAAAA ATTACAGCGT CGTCTTGCCT CACGCCTCGA TCGTTGGGTA
AGTCTGATGC GGATGCACGG TGGTGCACAG GCAGAAATGA TTGCCAGTGC ACCCGAAGAG
ATTCGCGATC TGTTCAGTAA ACGTATCAAG TTGATGGCCC CGTTATTAAA AGCCTGGAAA
GGTGCGCTGA AGGCAGAAAA CGCTGTCGAT TTTTCGGGCC TTATTCATCA GGCGATTGTG
ATTCTGGAGA AAGGTCGCTT TATCAGCCCG TGGAAGCATA TTCTGGTTGA TGAATTTCAG
GATATCTCGC CGCAGCGGGC AGCGTTGTTA GCGGCATTAC GCAAGCAAAA CAGTCAGACG
ACGTTGTTCG CCGTTGGTGA TGACTGGCAG GCGATTTACC GATTCAGCGG TGCGCAAATG
TCGCTCACCA CCGCTTTCCA TGAAAACTTT GGTGAAGGCG AACGCTGTGA TTTAGACACG
ACTTACCGTT TTAACAGTCG TATCGGTGAG GTGGCAAACC GGTTTATTCA GCAGAACCCA
GGCCAGCTGA AAAAGCCGCT AAACAGCTTA ACCAATGGAG ACAAAAAAGC CGTCACGTTA
TTGGATGAGA GTCAACTTGA CGCTTTGCTG GATAAGCTCT CTGGTTATGC CAAACCGGAA
GAGCGCATTC TGATCCTGGC GCGTTACCAT CACATGAGGC CTGCCAGCCT GGAAAAAGCG
GCAACACGCT GGCCGAAGTT GCAAATCGAC TTTATGACCA TTCATGCCAG CAAAGGGCAA
CAGGCGGATT ACGTCCTCAT CGTTGGCTTG CAGGAGGGAA GTGATGGTTT TCCGGCTGCG
GCGCGGGAGT CGATTATGGA AGAGGCGCTA CTGCCACCGG TTGAGGATTT CCCGGACGCT
GAAGAACGGC GGTTAATGTA CGTGGCGCTG ACCCGGGCAC GTCATCGGGT ATGGGCACTG
TTTAACAAAG AGAATCCCTC TCCCTTTGTG GAAATACTGA AAAATCTGGA TGTGCCGGTG
GCGAGAAAAC CGTAA
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| Protein sequence | MELKATTLGK RLAQHPYDRA VILNAGIKVS GDRHEYLIPF NQLLAIHCKR GLVWGELEFV
LPDEKVVRLH GTEWGETQRF YHHLDAHWRR WSGEMSEIAS GVLRQQLDLI ATRTGENKWL
TREQTSGVQQ QIRQALSALP LPVNRLEEFD NCREAWRKCQ AWLKDIESAR LQHNQAYTEA
MLTEYADFFR QVESSPLNPA QARAVVNGEH SLLVLAGAGS GKTSVLVARA GWLLARGEAS
PEQILLLAFG RKAAEEMDER IRERLHTEDI TARTFHALAL HIIQQGSKKV PIVSKLENDT
AARHELFIAE WRKQCSEKKA QAKGWRQWLT EEMQWSVPEG NFWDDEKLQR RLASRLDRWV
SLMRMHGGAQ AEMIASAPEE IRDLFSKRIK LMAPLLKAWK GALKAENAVD FSGLIHQAIV
ILEKGRFISP WKHILVDEFQ DISPQRAALL AALRKQNSQT TLFAVGDDWQ AIYRFSGAQM
SLTTAFHENF GEGERCDLDT TYRFNSRIGE VANRFIQQNP GQLKKPLNSL TNGDKKAVTL
LDESQLDALL DKLSGYAKPE ERILILARYH HMRPASLEKA ATRWPKLQID FMTIHASKGQ
QADYVLIVGL QEGSDGFPAA ARESIMEEAL LPPVEDFPDA EERRLMYVAL TRARHRVWAL
FNKENPSPFV EILKNLDVPV ARKP
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