| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1123 |
|---|
| Symbol | |
|---|
| ID | 6970627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 1154556 |
|---|
| End bp | 1156718 |
|---|
| Gene Length | 2163 bp |
|---|
| Protein Length | 720 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643385129 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002269628 |
|---|
| Protein GI | 209398790 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1289] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01666] hypothetical membrane protein, TIGR01666
[TIGR01667] integral membrane protein, YccS/YhfK family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00725319 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.391034 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTTTA TGCTAAGTCC TTTGCTCAAA CGCTATACCT GGAACAGCGC CTGGCTGTAT
TACGCGCGTA TTTTTATTGC GCTTTGTGGA ACCACAGCGT TTCCGTGGTG GCTGGGTGAT
GTAAAACTGA CGATTCCGCT AACGCTGGGG ATGGTGGCAG CGGCGCTGAC CGATCTCGAT
GACCGACTGG CGGGACGTTT GCGTAACCTC ATCATTACGC TGTTCTGCTT TTTTATCGCC
TCGGCCTCAG TAGAATTGCT GTTTCCCTGG CCCTGGCTAT TTGCGATTGG CTTAACGCTC
TCTACCAGCG GCTTCATTTT GCTCGGCGGT CTGGGTCAAC GCTATGCAAC AATTGCCTTC
GGTGCATTGC TGATCGCCAT TTACACTATG TTGGGAACAT CACTGTATGA GCACTGGTAT
CAGCAGCCGA TGTATCTGCT GGCCGGTGCC GTCTGGTACA ACGTCCTGAC ACTTATTGGT
CATCTGCTGT TCCCGGTCCG CCCGCTGCAG GACAACCTGG CGCGTTGCTA TGAACAACTG
GCGCGTTATC TTGAGCTCAA GTCGCGCATG TTTGATCCTG ATATTGAAGA TGAAAGCCAG
GCACCGCTGT ACGATTTGGC TCTCGCCAAC GGTCTGCTGA TGGCGACATT GAATCAGACG
AAACTCTCGC TGCTGACCCG CTTACGTGGC GATCGTGGTC AACGGGGAAC GCGTCGCACG
CTGCATTATT ACTTTGTCGC ACAGGATATT CACGAGCGTG CCAGCTCTTC TCATATTCAG
TATCAAACAT TGCGTGAACA TTTTCGCCAC AGCGACGTGC TGTTCCGTTT TCAGCGGCTG
ATGTCGATGC AGGGCCAGGC GTGCCAGCAA CTGTCACGCT GTATTTTGTT GCGTCAGCCT
TATCAACATG ATCCGCATTT TGAGCGCGCT TTTACGCATA TTGATGCTGC GCTGGAGCGG
ATGCGCGATA ACGGCGCACC CGCCGATTTA CTCAAAACAC TGGGATTTTT GCTGAACAAT
TTACGCGCCA TTGATGCCCA ACTGGCAACA ATTGAATCAG AACAGGCCCA GGCACTACCC
CATAATAATG ACGAAAATGA GCTCGCTGAT GACAGCCCGC ACGGGTTGAG TGATATCTGG
CTGCGTCTTA GCCGTCACTT CACGCCGGAA TCCGCCCTCT TCCGTCATGC GGTAAGAATG
TCGCTGGTGT TGTGCTTCGG CTACGCCATC ATTCAGATAA CCGGAATGCA TCACGGGTAT
TGGATCTTGC TGACAAGTTT GTTTGTCTGC CAGCCAAACT ATAACGCCAC GCGCCACCGC
CTGAAGTTAA GGATTATTGG TACGCTGGTA GGTATCGCCA TTGGCATTCC TGTGCTGTGG
TTTGTGCCAT CACTGGAAGG GCAGCTGGTG CTGCTGGTTA TTACCGGCGT GCTCTTTTTT
GCCTTCCGTA ACGTGCAATA CGCTCATGCA ACGATGTTCA TCACACTTTT GGTGCTACTG
TGTTTTAACT TACTGGGTGA AGGTTTTGAA GTAGCGTTAC CTCGCGTAAT CGATACGCTG
ATTGGTTGTG CCATTGCGTG GGCGGCAGTG AGCTACATCT GGCCTGACTG GCAGTTTCGC
AATCTGCCGC GCATGCTCGA ACGCGCCACA GAGGCCAACT GTCGGTATCT CGATGCCATA
CTGGAGCAAT ACCATCAGGG GCGTGATAAC CGTCTGGCGT ATCGTATTGC CCGCCGCGAT
GCACACAACC GTGATGCTGA GCTGGCGTCG GTGGTATCAA ATATGTCCAG CGAGCCGAAC
GTTACCCCGC AAATTCGCGA AGCCGCGTTT CGGTTGCTGT GCCTTAACCA TACGTTTACC
AGCTATATCT CAGCCCTCGG TGCTCACCGG GAGCAGTTAA CTAATCCTGA AATTCTGGCG
TTTCTTGATG ACGCAGTTTG CTATGTTGAT GACGCGTTAC ATCATCAACC TGCTGATGAA
GAACGCGTCA ATGAGGCATT AGCTAGCCTG AAACAGCGGA TGCAGCAACT TGAACCACGG
GCAGACAGCA AAGAACCTCT GGTCGTACAA CAAGTTGGAC TATTGATTGC ATTACTGCCT
GAGATTGGTC GTCTGCAACG CCAGATTACT CAAGTTCCGC AGGAAACTCC TGTTTCGGCG
TAA
|
|---|
| Protein sequence | MAFMLSPLLK RYTWNSAWLY YARIFIALCG TTAFPWWLGD VKLTIPLTLG MVAAALTDLD
DRLAGRLRNL IITLFCFFIA SASVELLFPW PWLFAIGLTL STSGFILLGG LGQRYATIAF
GALLIAIYTM LGTSLYEHWY QQPMYLLAGA VWYNVLTLIG HLLFPVRPLQ DNLARCYEQL
ARYLELKSRM FDPDIEDESQ APLYDLALAN GLLMATLNQT KLSLLTRLRG DRGQRGTRRT
LHYYFVAQDI HERASSSHIQ YQTLREHFRH SDVLFRFQRL MSMQGQACQQ LSRCILLRQP
YQHDPHFERA FTHIDAALER MRDNGAPADL LKTLGFLLNN LRAIDAQLAT IESEQAQALP
HNNDENELAD DSPHGLSDIW LRLSRHFTPE SALFRHAVRM SLVLCFGYAI IQITGMHHGY
WILLTSLFVC QPNYNATRHR LKLRIIGTLV GIAIGIPVLW FVPSLEGQLV LLVITGVLFF
AFRNVQYAHA TMFITLLVLL CFNLLGEGFE VALPRVIDTL IGCAIAWAAV SYIWPDWQFR
NLPRMLERAT EANCRYLDAI LEQYHQGRDN RLAYRIARRD AHNRDAELAS VVSNMSSEPN
VTPQIREAAF RLLCLNHTFT SYISALGAHR EQLTNPEILA FLDDAVCYVD DALHHQPADE
ERVNEALASL KQRMQQLEPR ADSKEPLVVQ QVGLLIALLP EIGRLQRQIT QVPQETPVSA
|
|---|
| |