Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_1121 |
Symbol | ompA |
ID | 6969157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 1151839 |
End bp | 1152903 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643385126 |
Product | outer membrane protein A |
Protein accession | YP_002269625 |
Protein GI | 209397392 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000116879 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.89417 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGATGATA ACGAGGCGCA AAAAATGAAA AAGACAGCTA TCGCGATTGC AGTGGCACTG GCTGGTTTCG CTACCGTAGC GCAGGCCGCT CCGAAAGATA ACACCTGGTA CACTGGTGCT AAACTGGGCT GGTCCCAGTA CCATGACACT GGTTTCATCA ACAACAATGG CCCGACCCAT GAAAACCAAC TGGGCGCTGG TGCTTTTGGT GGTTACCAGG TTAACCCGTA TGTTGGCTTT GAAATGGGTT ACGACTGGTT AGGTCGTATG CCGTACAAAG GCAGCGTTGA AAACGGTGCA TACAAAGCTC AGGGCGTTCA ACTGACCGCT AAACTGGGTT ACCCAATCAC TGACGACCTG GACATCTACA CTCGTCTGGG TGGTATGGTA TGGCGTGCAG ACACTAAATC CAACGTTTAT GGTAAAAACC ACGACACCGG CGTTTCTCCG GTCTTCGCTG GCGGTGTTGA GTACGCGATC ACTCCTGAAA TCGCTACCCG TCTGGAATAC CAGTGGACCA ACAACATCGG TGACGCACAC ACCATCGGCA CTCGTCCGGA CAACGGCATG CTGAGCCTGG GTGTTTCCTA CCGTTTCGGT CAGGGCGAAG CAGCTCCAGT AGTTGCTCCG GCTCCAGCTC CGGCACCGGA AGTACAGACC AAGCACTTCA CTCTGAAGTC TGACGTTCTG TTCAACTTCA ACAAAGCAAC CCTGAAACCG GAAGGTCAGG CTGCTCTGGA TCAGCTGTAC AGCCAGCTGA GCAACCTGGA TCCGAAAGAC GGTTCCGTAG TTGTTCTGGG TTACACCGAC CGCATCGGTT CTGACGCTTA CAACCAGGGT CTGTCCGAGC GCCGTGCTCA GTCTGTTGTT GATTACCTGA TCTCCAAAGG TATCCCGGCA GACAAGATCT CCGCACGTGG TATGGGCGAA TCCAACCCGG TTACTGGCAA CACCTGTGAC AACGTGAAAC AGCGTGCTGC ACTGATCGAC TGCCTGGCTC CGGATCGTCG CGTAGAGATC GAAGTTAAAG GTATCAAAGA CGTTGTAACT CAGCCGCAAG CTTAA
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Protein sequence | MDDNEAQKMK KTAIAIAVAL AGFATVAQAA PKDNTWYTGA KLGWSQYHDT GFINNNGPTH ENQLGAGAFG GYQVNPYVGF EMGYDWLGRM PYKGSVENGA YKAQGVQLTA KLGYPITDDL DIYTRLGGMV WRADTKSNVY GKNHDTGVSP VFAGGVEYAI TPEIATRLEY QWTNNIGDAH TIGTRPDNGM LSLGVSYRFG QGEAAPVVAP APAPAPEVQT KHFTLKSDVL FNFNKATLKP EGQAALDQLY SQLSNLDPKD GSVVVLGYTD RIGSDAYNQG LSERRAQSVV DYLISKGIPA DKISARGMGE SNPVTGNTCD NVKQRAALID CLAPDRRVEI EVKGIKDVVT QPQA
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